Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1554 ATGATTTGGATAGCCATTTTTTTGGTTTCTCTTGCTTATATGTGGCTACGGAGAATTAGCAAGAACAAGGCAAAGAAATTGCCACCTGGTCCCAGAGGGTTGCCAATTTTGGGAAGCCTTCACAAGTTGGGACCAAATCCTCATCGTGACCTGCACCAACTAGCCCAAAAATATGGACCTGTCATGCACTTGCGCTTAGGTTTTGTGCCCACCATTGTTGTTTCTTCTCCACAAGCTGCTGAACTGTTCCTCAAGACCCATGACCTTGTCTTTGCTAGTAGACCACCTCTTGAAGCTGCAAAATACATCTCTTGGGAGCAGAGAAACTTAAGCTTTGCTGAATATGGCTCTTACTGGCGCAACGTGCGCAAGATGTGCACGTTGGAATTGCTAAGCCACACCAAAATTAACTCCTTCAGAAGCATGAGGGAAGAGGAGCTTGACCTGATGGTCAAGCTTCTGCGAGAGGCAGCCAAAGATGGAGCTGTTGTTGATCTCAGTGCCAAAGTTTCAACACTCAGTGCAGACATGTCTTGCAGAATGGTTTTGGGGAAGAAGTACATGGACCGCGACTTGGATGAGAAGGGGTTCAAGGCTGTGATGCAAGAGGGAATGCACTTAGCAGCAACTCCTAACATGGGAGATTACATTCCTTACATTGCTGCACTTGACCTTCAAGGCCTAACCAAGCGCATGAAAGTAGTTGGCAAAATCTTCGATGACTTCTTCGAGAAAATTATTGATGAACACTTGCAATCAGAGAAGGGTGAAGACAGGACAAAGGATTTTGTGGATGTCATGTTGGACTTTGTCGGTACTGAAGAATCTGAATACCGCATTGAACGCCCCAATATCAAAGCCATATTGCTGGATATGTTGGCTGGTTCAATGGATACTTCTGCTACAGCAATTGAGTGGACGCTTTCAGAGCTCCTAAAGAATCCAAGGGTGATGAAGAAAGTCCAAATGGAATTAGAAACTGTGGTGGGTATGAAGAGGAAGGTGGAGGAATCGGACTTGGACAAGTTGGTGTATTTGGACATGGTTGTAAAGGAAAGCATGAGGCTCCATCCGGTGGCACCGTTGCTCATACCACACCAGTCCACGGAAGATTGCATGGTTGGAGATTTGTTCATACCTAAAAAGTCAAGGGTGATAGTGAATGCATGGGCAATTATGAGAGACCCAAGTGCTTGGGATGAGGCAGAGAAGTTCTGGCCAGAGAGATTTGAAGGAAGCAGCATAGATGTGAGAGGGCGTGAGTTCGAGCTGATACCATTTGGGTCTGGCAGAAGGGGTTGTCCAGGATTGCAATTGGGTCTAACTGTGGTTCGTCTAACAGTGGCACAGATTGTGCATTGTTTTGATTGGAAACTACCAAAAGACATTTTGCCAGATGACTTGGACATGAAAGAGGAGTTCGGACTCACAATGCCTAGGGCCAATCATCTACATGCCATTCCCACGTATCGGCTTTCCAATGAAAGGGATTAG 1494 0.4598 MIWIAIFLVSLAYMWLRRISKNKAKKLPPGPRGLPILGSLHKLGPNPHRDLHQLAQKYGPVMHLRLGFVPTIVVSSPQAAELFLKTHDLVFASRPPLEAAKYISWEQRNLSFAEYGSYWRNVRKMCTLELLSHTKINSFRSMREEELDLMVKLLREAAKDGAVVDLSAKVSTLSADMSCRMVLGKKYMDRDLDEKGFKAVMQEGMHLAATPNMGDYIPYIAALDLQGLTKRMKVVGKIFDDFFEKIIDEHLQSEKGEDRTKDFVDVMLDFVGTEESEYRIERPNIKAILLDMLAGSMDTSATAIEWTLSELLKNPRVMKKVQMELETVVGMKRKVEESDLDKLVYLDMVVKESMRLHPVAPLLIPHQSTEDCMVGDLFIPKKSRVIVNAWAIMRDPSAWDEAEKFWPERFEGSSIDVRGREFELIPFGSGRRGCPGLQLGLTVVRLTVAQIVHCFDWKLPKDILPDDLDMKEEFGLTMPRANHLHAIPTYRLSNERD* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1554 497 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 SUPERFAMILY Cytochrome P450 28 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Gso5g1554 497 PANTHER CYTOCHROME P450 93A3-LIKE 1 493 - -
Gso5g1554 497 Pfam Cytochrome P450 28 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1554 497 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 493 - -
Gso5g1554 497 Gene3D Cytochrome P450 14 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1554 Gso-Chr5 38953833 38955709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1554 21 487 Cytochrome P450 AT3G48310 40.725 3.11e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1554 K20562 - gmx:100809526 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1554 5 38953833 38955709 Gso8g1186 8 10840112 10842452 GST