Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso5g1551 | ATGGATGCTACATCCTCACCGTTTGTTTCCTCAAGAAGAATGGGTGTATATGATCCTATCCACCAAATTAGCACGTGGGAAGAAAATTTCAAAAGTAATGATACTAATAATTTAACTGTATCCACATCCATAATTGGGGAGGTGGACATGAAGTTAGATAATCAGTTTCAGGTGCAATCAGAGGATGATACTCATGGAATATTTGGCACATCTGTGAAGTACGACCAAGACACTAACAGACTTACTGATAAGACACAACGACGTCTAGCACAAAATCGAGAGGCTGCTCGCAAGAGTCGATTGAGGAAAAAGGCATACGTGCAGCAGTTAGAATCATGTCGTTTGAAGCTCTTGCAGTTAGAGCAAGAGGTAGATCATGCAAAACAACAGGGATTGTATATTGGCAACGGATTGGGTTCTAATAATTTGGGTTTTGCTGGCTCTGTAAATTCAGGAATAACCCTTTTCAAGATGGAGTATGGAAACTGGGTGGAGGAACAAAATAGACAAATTTTGGAACTGAGAACTGCTTTAAGTTCTCATATCGGTGACATACAGCTCGGGACACTTGTACAAGGCATAATGAACCACTACACCAAACTCTTTGGCATGAAATCTGCTGCAGCAAAAGCAGATGTTTTCTATGTTATGTCTGGTATGTGGAAGACAACAGCTGAACGATTTTTCTTGTGGATTGGAGGATTTCGCCCCTCTGAACTTCTAAAGGTTCTGGTCCCTCTAAGTGAACCTTTGACAGAGCAACAACGGTTTGATGCCTATGGCCTTGAAAAATCATGCCAGCAAGCAGAAGATGCCCTTTCTCAAGGTATGGAAAAACTTCAGCAAATGCTTTCGGACTCTGTAGGACCAGGACAACTAGTTGAAGGAACCCACATTCCCCAAATGGATACTGCAATGGAGAGGCTAGAAGCTCTTGTGAGCTTTGTGAACCAGGCTGATCATCTACGACAAGAAACGTTGCGGCAAATGTATCGAATACTTACCATACGTCAGACTGGTCGATTTCTGCTTGCTTTGGGGGAATATTTTCAACGCCTGCGGGCTTTGAGCAAACTTTGGGTTAATCGTCCTCAATTTCCAGGACATGCTTAG | 1113 | 0.4259 | MDATSSPFVSSRRMGVYDPIHQISTWEENFKSNDTNNLTVSTSIIGEVDMKLDNQFQVQSEDDTHGIFGTSVKYDQDTNRLTDKTQRRLAQNREAARKSRLRKKAYVQQLESCRLKLLQLEQEVDHAKQQGLYIGNGLGSNNLGFAGSVNSGITLFKMEYGNWVEEQNRQILELRTALSSHIGDIQLGTLVQGIMNHYTKLFGMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKVLVPLSEPLTEQQRFDAYGLEKSCQQAEDALSQGMEKLQQMLSDSVGPGQLVEGTHIPQMDTAMERLEALVSFVNQADHLRQETLRQMYRILTIRQTGRFLLALGEYFQRLRALSKLWVNRPQFPGHA* | 371 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso5g1551 | 370 | Pfam | Seed dormancy control | 171 | 245 | IPR025422 | GO:0006351|GO:0043565 | |
Gso5g1551 | 370 | PANTHER | BZIP FAMILY TRANSCRIPTION FACTOR | 1 | 368 | - | - | |
Gso5g1551 | 370 | Coils | Coil | 103 | 130 | - | - | |
Gso5g1551 | 370 | Pfam | bZIP transcription factor | 83 | 116 | IPR004827 | GO:0003700|GO:0006355 | |
Gso5g1551 | 370 | ProSiteProfiles | DOG1 domain profile. | 153 | 363 | IPR025422 | GO:0006351|GO:0043565 | |
Gso5g1551 | 370 | Gene3D | - | 83 | 132 | - | - | |
Gso5g1551 | 370 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 368 | - | - | |
Gso5g1551 | 370 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 87 | 102 | IPR004827 | GO:0003700|GO:0006355 | |
Gso5g1551 | 370 | SUPERFAMILY | Leucine zipper domain | 84 | 123 | IPR046347 | GO:0003700|GO:0006355 | |
Gso5g1551 | 370 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 82 | 112 | IPR004827 | GO:0003700|GO:0006355 | |
Gso5g1551 | 370 | SMART | brlzneu | 80 | 140 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso5g1551 | Gso-Chr5 | 38932560 | 38940318 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso5g1551 | 1 | 367 | Calmodulin-binding Proteins | AT5G65210 | 64.595 | 1.31e-173 | 486 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Gso5g1551 | DOG1 | 3e-29 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso5g1551 | K14431 | - | gmx:100808443 | 736.487 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso5g1551 | 5 | 38932560 | 38940318 | Gso5g1551 | 5 | 38932560 | 38940318 | ECH | |
Gso5g1551 | 5 | 38932560 | 38940318 | Gso8g1182 | 8 | 10810738 | 10817370 | GST | |
Gso5g1551 | 5 | 38932560 | 38940318 | Gso18g0181 | 18 | 1580131 | 1586039 | PCT | |
Gso5g1551 | 5 | 38932560 | 38940318 | Gso13g1439 | 13 | 29873797 | 29879602 | PCT |