Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1526 ATGACGCAGAATGCGATAGTGTCCAAGACAAAATCGGGGATCAACCGGGACATAACCGTGCCACAAAAGCCACTGGCGGCGGCGGCGGCGGGGGGGTACATTCCCATTCCGAGGAGGAGGGTTTTGAAGAACCTGGAAATCAATGCATGGGTTGATTCCATGAGATCCTCTTCTCCAACCAATTCCAAATCCACCTCTTCTCTCGCAGAAGAACACAGCACTTGGATTCTTCGCCACCCCTCAGCATTAGACATGTTCGAGCAAATTATGGATGCGTCCCGGGGAAAGCAAATTGTCATGTTTCTCGACTATGATGGTACTTTGTCGCCTATTGTTGATGACCCAGACCGTGCTTTCATGTCGGATTCGATGAGGAGAACGGTGAGGAAACTTGCAAGGTGTTTTCCTACTGCTATAGTTACCGGCAGATGCAAAGACAAGGTTTACAATTTTGTTCGCTTGGCTGAGCTATATTATGCTGGAAGCCATGGCATGGATATTCAAGGGCCAACAAGAACCTCCAAATACAGCAACAAAGATAAAGGAGAGCCTGTTCTTTTTCAACCTGCTAGTGAATTTCTTCCCATGATTGATGAGGTGTACCATCAATTAGTTGAGAAAATGAAATCAATTCCTGGAGCCATGGTGGAGAACAACAAGTTCTGCTGTTCTGTTCATTTTCGCTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACAGGAAGTGAGATCAGTATTAAAAGAGTACCCGAAGCTTCGTCTTAACCAAGGAAGGAAGGTATTAGAGATTCGTCCATCTATTAAATGGGACAAAGGGAAGGCGCTGGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTCTTTCCTGTTTACATTGGAGATGATAAAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGGATTCTTGTCTCGAAATTTCCAAAGGACACTACTGCATCATACTCTTTACAAGAACCAAACGAGGTGATGGATTTCCTTCAACGTTTGGTGGAGTGGAAACAAGTATCCCTCCGACTCAGAACACGTTCTCGGGTGTAA 1086 0.4475 MTQNAIVSKTKSGINRDITVPQKPLAAAAAGGYIPIPRRRVLKNLEINAWVDSMRSSSPTNSKSTSSLAEEHSTWILRHPSALDMFEQIMDASRGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRRTVRKLARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIQGPTRTSKYSNKDKGEPVLFQPASEFLPMIDEVYHQLVEKMKSIPGAMVENNKFCCSVHFRCVDEKKWSELAQEVRSVLKEYPKLRLNQGRKVLEIRPSIKWDKGKALEFLLESLGFANCNDVFPVYIGDDKTDEDAFKKLRDRGQGFGILVSKFPKDTTASYSLQEPNEVMDFLQRLVEWKQVSLRLRTRSRV* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1526 361 TIGRFAM T6PP: trehalose-phosphatase 96 346 IPR003337 GO:0003824|GO:0005992
Gso5g1526 361 CDD HAD_TPP 99 339 - -
Gso5g1526 361 Pfam Trehalose-phosphatase 101 335 IPR003337 GO:0003824|GO:0005992
Gso5g1526 361 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 31 358 - -
Gso5g1526 361 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 100 311 IPR006379 -
Gso5g1526 361 Gene3D - 98 186 IPR023214 -
Gso5g1526 361 Gene3D - 198 358 IPR023214 -
Gso5g1526 361 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 31 358 IPR044651 GO:0004805|GO:0005992
Gso5g1526 361 SUPERFAMILY HAD-like 99 348 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1526 Gso-Chr5 38671701 38674609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1526 89 352 Trehalose Biosynthesis Gene Families AT1G06410 24.911 2.14e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1526 K01087 - gmx:100803119 708.753