Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1503 ATGGCAATAACACCTTTTGGTAGTACATCTTCTGCACAATGGGGAATTCATCCTCAGCTATTACTAAGATCCAGTATCACAGGAAAGTTTGCACCATCCAGCCACAAGGTAAGCTTTATGACTGCAACAAGTTCAAGCTTTTTTTCTCGAGATTCCACACTGCTCAATGTGGGTGCGCCCCAAACTTTTAATCGTCGCAAGGGATCGAGGTTGATTGTTAGAGCTAATGCTGATTATTATTCTGTCCTTGGGGTTTCAAGAAATGCTAGTAAATCTGAAATTAAGAGCGCATATCGGAAGCTTGCCCGGAATTATCATCCAGATGTCAACAAAGAACCTGGAGCTGAACAAAAATTTAAGGAAATTAGTAACGCATATGAGGTGTTATCAGATGATGAGAAACGATCCATATATGACAGATTTGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGGATGGGGGATTTCAGCAATCCATTTGATCTGTTTGAATCACTGTTTGAGGGCATGAATCGCGGTGCAGGTTCCAGAGGTTCTTGGAATGGAGCAATTGATGGTGAAGATGAGTATTACAGTCTTGTTTTGAATTTTAAAGAAGCAGTTTTTGGCATAGAAAAAGAGATAGAGATAAGCCGATTAGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGGACTACACCATCCAGATGTAGCACTTGTGGAGGTCAAGGCCGGGTTGTCTCATCAACAAGAACTCCATTAGGCATCTTCCAGCAGTCAATGACATGTTCTTCATGCAATGGGACTGGAGAAATTTCAACACCTTGCAATACATGTTCTGGGGATGGTCGGCTGAGGAAATCAAAACGGATAAGCCTGAAGGTCCCAGCTGGTGTGGACTCTGGTAGTCGTCTGAGGGTCCGGAATGAGGGGAATGCTGGAAGGAGAGGTGGTTCCCCTGGTGACCTCTTTGTAGTTATTGAGGTTATCCCAGATCCTGTCCTTAAACGTGATGACACCAACATTTTATACACCTGCAAGGTTTCGTATATTGATGCAATCCTGGGGACTACAATTAAGGTTCCTACTGTAGACGGAACAGTCGATTTGAAAATTCCTGCTGGGACACAACCGAACACAACACTTGTTATGGCTAAGAAAGGTGTTCCCTTCCTGAATAAAGACAATATGAGGGGTGATCAATTGGTTCGTGTGCAAGTTGAAATTCCTAAAAGACTGAGCAATGATGAGAGAAAGCTTATTGAGGAACTTGCTGATTTAAGCAAAGGCAAGACTGCCACGGGTAGGAGATAA 1302 0.4355 MAITPFGSTSSAQWGIHPQLLLRSSITGKFAPSSHKVSFMTATSSSFFSRDSTLLNVGAPQTFNRRKGSRLIVRANADYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRFGEAGLKGSGMGMGDFSNPFDLFESLFEGMNRGAGSRGSWNGAIDGEDEYYSLVLNFKEAVFGIEKEIEISRLESCGTCNGSGAKPGTTPSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEISTPCNTCSGDGRLRKSKRISLKVPAGVDSGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGTVDLKIPAGTQPNTTLVMAKKGVPFLNKDNMRGDQLVRVQVEIPKRLSNDERKLIEELADLSKGKTATGRR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1503 433 CDD DnaJ_zf 216 279 IPR001305 GO:0031072|GO:0051082
Gso5g1503 433 ProSitePatterns Nt-dnaJ domain signature. 119 138 IPR018253 -
Gso5g1503 433 Gene3D - 326 432 - -
Gso5g1503 433 PRINTS DnaJ domain signature 80 98 IPR001623 -
Gso5g1503 433 PRINTS DnaJ domain signature 98 113 IPR001623 -
Gso5g1503 433 PRINTS DnaJ domain signature 114 134 IPR001623 -
Gso5g1503 433 PRINTS DnaJ domain signature 134 153 IPR001623 -
Gso5g1503 433 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 203 283 IPR036410 -
Gso5g1503 433 Gene3D DnaJ domain 75 179 IPR036869 -
Gso5g1503 433 Gene3D - 186 321 - -
Gso5g1503 433 SUPERFAMILY HSP40/DnaJ peptide-binding domain 184 339 IPR008971 GO:0006457|GO:0051082
Gso5g1503 433 PANTHER BNAA01G34580D PROTEIN 29 433 - -
Gso5g1503 433 Pfam DnaJ domain 78 139 IPR001623 -
Gso5g1503 433 CDD DnaJ 78 131 IPR001623 -
Gso5g1503 433 Hamap Chaperone protein DnaJ [dnaJ]. 75 429 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gso5g1503 433 Gene3D - 216 279 - -
Gso5g1503 433 ProSiteProfiles Zinc finger CR-type profile. 203 284 IPR001305 GO:0031072|GO:0051082
Gso5g1503 433 CDD DnaJ_C 187 409 - -
Gso5g1503 433 SUPERFAMILY Chaperone J-domain 75 171 IPR036869 -
Gso5g1503 433 TIGRFAM DnaJ_bact: chaperone protein DnaJ 78 422 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gso5g1503 433 Pfam DnaJ central domain 216 279 IPR001305 GO:0031072|GO:0051082
Gso5g1503 433 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 29 433 - -
Gso5g1503 433 Pfam DnaJ C terminal domain 191 406 IPR002939 -
Gso5g1503 433 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 417 IPR008971 GO:0006457|GO:0051082
Gso5g1503 433 SMART dnaj_3 77 134 IPR001623 -
Gso5g1503 433 ProSiteProfiles dnaJ domain profile. 78 142 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1503 Gso-Chr5 38478914 38484669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1503 79 139 C2H2 Transcription Factor Family AT1G74250 44.776 2.79e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1503 K03686 - gmx:100792363 859.751