Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1495 ATGCTTGCAAGCTTAACCATGGAACGGTATGAGATAATTAAAGATATTGGGTCAGGGAACTTTGGTGTGGCAAAGCTGGTCAAGGAAAAATGGAGTGGTGAATTGTATGCTATCAAGTTCATTGAGAGAGGCTTCAAGATTGATGAACACGTGCAAAGAGAGATTATAAATCATAGGTCCTTGAAGCATCCCAATATCATTAGATTTAAAGAGGTGTTACTCACTCCAACTCATCTTGCAATAGTCATGGAATATGCTGCCGGGGGAGAACTGTTTGAAAGAATATGCAGTGCTGGGAGATTCAGTGAGGACGAGGCGAGATATTTCTTTCAGCAACTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCATAGAGATCTTAAGCTGGAAAACACACTTCTAGATGGAAGCTCAGCACCACGACTTAAAATCTGTGACTTCGGTTACTCAAAGTCATCTGTTTTGCACTCCCAGCCAAAATCTACTGTAGGAACCCCTGCCTATATTGCACCAGAGGTTTTGTCAAGAAGAGAATATGATGGCAAGGTCGCGGATGTTTGGTCTTGTGGGGTGACCTTATATGTGATGTTGGTTGGAGCATATCCTTTTGAAGACCCAGAAGACCCAAGAAACTTCAGAAAAACACTTCAGCGAATTCTTAGTGTCCACTATTCTATTCCAGACTATGTACGTATCAGTAAAGAGTGTAGGTACCTTTTGTCTCGAATATTTGTGGCCAACCCGGAAAAGAGAATTACCATACCGGAGATTAAAATGCACCCTTGGTTCCTCATGAATTTGCCACTAGAATTTATGGACGAGAGTGAAGGGGTGTTGCAAAATGATGATGTGAATGACGACTCATCTGAGACTCAAAGCATTGAAGAAATACTGTCCATAATTCAAGAGGCTAGGAAACCGAGTGAGGGCCCAAAAGTTAGTGAGCAATTTGTTGGGGGCAGCATGGACCTTGATGATATTGATGCGGATGCTGACATTGATGACATTGAGACAAGCGGTGATTTTGTCTGTGCATTGTGA 1050 0.4219 MLASLTMERYEIIKDIGSGNFGVAKLVKEKWSGELYAIKFIERGFKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRISKECRYLLSRIFVANPEKRITIPEIKMHPWFLMNLPLEFMDESEGVLQNDDVNDDSSETQSIEEILSIIQEARKPSEGPKVSEQFVGGSMDLDDIDADADIDDIETSGDFVCAL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1495 349 Gene3D Transferase(Phosphotransferase) domain 1 86 271 - -
Gso5g1495 349 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 8 343 - -
Gso5g1495 349 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Gso5g1495 349 SMART serkin_6 10 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1495 349 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Gso5g1495 349 ProSiteProfiles Protein kinase domain profile. 10 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1495 349 SUPERFAMILY Protein kinase-like (PK-like) 6 275 IPR011009 -
Gso5g1495 349 CDD STKc_SnRK2 9 265 - -
Gso5g1495 349 Pfam Protein kinase domain 10 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1495 349 PANTHER SERINE/THREONINE KINASE 8 343 - -
Gso5g1495 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1495 Gso-Chr5 38416689 38419836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1495 9 276 CBL-interacting serine-threonine protein kinases AT4G24400 43.321 5.41e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gso5g1495 Pkinase 5.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1495 K14498 - gmx:100807981 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1495 5 38416689 38419836 Gso8g1125 8 10340903 10344092 GST