Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1481 ATGTCGAAACCCTGGGGCAACATCGGAGCCTGGGCTGCCGATTCCGAACGGGCCGAGGCCGAGGAGGCTGAGGCCCAGGCTGCGGCCGCGGCGGTCGAGCCCCAAAGCTTTCCCAGCCTCAAGGAGGCCGTGAACTCCAAGCCCAAGAAGAAGAAGGGAACCACCATCACGCTTTCCGAGTTCAACCGTGGCGGTTTCGACCAGGGCCTTACGCGTGACGAGATGCTCGCCCTTCCCACCGGTCCCAAGGAGCGTTCCGCCGATGAAATGCCGTTCAACCGCCTTGGCGGCGGTTTCTCCTCCTATGACCGCTCCGGCGGTCGCTCGCGCGACCGAGACGGCGGCAACAACGAAGGTTCGTGGGGCGGAGGAGGCAGAAGATCCTACGGCGGATTCGACGAGGAGCGCAGGGGTCCGAATCCTAGGGTTTCGGAACTCGATCAGCCGTCCAGGGCTGATGAGGTTGATAATTGGGCGTCTGTGAAGAAATCTCTCCCTGCCTTCGATTCCGGTCGCCAGAATCGCTTTGGTGGCGGCGGTTATGGCGGTTCTGGTGGTGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTTTTGGTGGTGCGTCTAGGGCTGATGATGTGGACAGTTGGGCGGCTGGTAAGAAGCCTGTTCCTGTTAGATCTTCCAATTTCGGTTCTGGTTTTCGCGATTCCGGAGTGGAGCCTGATCGGTGGACGAGAGGCGGTCCGCCGCGTGAGGTTGACCGGACGGAGCGACCGAGGCTGGTGTTAGATCCGCCACGAGGCGATGGTGTGGTGAACGAGTCTCCGGTGAAGGCATCGAATAAGGCAAATCCGTTTGGCGCGGCGAGGCCGCGGGAGCAGGTGTTGGCTGAAAAGGGTTTGGATTGGAAAAAGATGGATTCGGAGATTGAGACGAAGAAGACGAGCCGTCCCCCGAGTTCGCACTCTAGCAGGCCTTCAAGTGCTCAGTCCAATCGCTCTGAGGGTCCTGGGTTGCAGGGGACCGATGCTGTGGTGAAATCGAGGCCCAAGGTGAACCCCTTTGGGGATGCCAAGCCTAGGGAGGCTGTGCTGGGCGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGAATTGGAGCATCGCTCTGTTGACAGGCCTGAGACAATGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTAAAGAAAGAACTTGAGAAAGAGTCTACAATAAATTCAAACAAGGAATCTGTGGATGAGGCTGGTGGAGACCAAACCAGTACACATGCAATATTACAACAGAAAGAAAAGGAGCTGGAACTTCTTATCCGTGATTTGGACGACAAAGTTCGTTTTGGGCAGAAAGCCATTGAAAGGCCAGGTTCATCGGCAGGAAAGTCTTCTACTTTTTCTGATAGGCCACATTCTAGATCTGGCTCCTTTGAGGATTCTAGAAGTGTGGATTTTACAGACAGACCTCGATCTCGTGGTACAGGAGATATGTGGATGCATCCTAGTGATGACAGAAGACAGTTTCAAGGTAGCAGGGAAAGGGGATGGTTTTCTGGCAGCCGAGACTTGAATAGGTCAACGTCAAGAGAGAGATGGTGA 1593 0.5562 MSKPWGNIGAWAADSERAEAEEAEAQAAAAAVEPQSFPSLKEAVNSKPKKKKGTTITLSEFNRGGFDQGLTRDEMLALPTGPKERSADEMPFNRLGGGFSSYDRSGGRSRDRDGGNNEGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSLPAFDSGRQNRFGGGGYGGSGGGGGGGGGGGGFGGASRADDVDSWAAGKKPVPVRSSNFGSGFRDSGVEPDRWTRGGPPREVDRTERPRLVLDPPRGDGVVNESPVKASNKANPFGAARPREQVLAEKGLDWKKMDSEIETKKTSRPPSSHSSRPSSAQSNRSEGPGLQGTDAVVKSRPKVNPFGDAKPREAVLGERGMDWRKIDLELEHRSVDRPETMEEKLLKEEIDNLKKELEKESTINSNKESVDEAGGDQTSTHAILQQKEKELELLIRDLDDKVRFGQKAIERPGSSAGKSSTFSDRPHSRSGSFEDSRSVDFTDRPRSRGTGDMWMHPSDDRRQFQGSRERGWFSGSRDLNRSTSRERW* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1481 530 Coils Coil 423 443 - -
Gso5g1481 530 Coils Coil 13 33 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 232 257 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 288 311 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 455 469 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 129 158 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 448 530 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 470 509 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 39 360 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 1 23 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 399 426 - -
Gso5g1481 530 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 530 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 312 331 - -
Gso5g1481 530 Coils Coil 385 405 - -
Gso5g1481 530 MobiDBLite consensus disorder prediction 409 424 - -
Gso5g1481 530 Pfam Plant specific eukaryotic initiation factor 4B 1 513 IPR010433 GO:0003743
Gso5g1481 530 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 530 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1481 Gso-Chr5 38234103 38238943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1481 1 530 Eukaryotic Initiation Factors Gene Family AT3G26400 55.476 3.54e-153 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1481 - - gmx:100784238 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1481 5 38234103 38238943 Gso8g1109 8 10173823 10180388 GST