Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1480 ATGGGAGTCTTCACCTTTGTCGTTCGCAAATCCGGCGCCGAATGGAGCGCCAAGCAACATTCCGGCGACATCGAGGCCTCCGCCGACTCCACCTACGATCTCCAAAGGAAGCTCGTGCAAGCCGCTCTCGCCGTTGATTCCTCCGGTGGAGTCCAGTCCTCCTTCTCTCCCGTGTCTCCTACCTCCGCTGTGTTCCAGGTGATAGTGGGTGGTGCTGTATTCGTTGGAGGTGGCGGTGGTGCTGTTGCAGCTGCACCTGCAGGTGGTGCTGCTGCAGCTGATGCTGCCCCGGCTGCTGAGAAAAAGGAAGAAAAGGTGGAGGAAGAGTCCGATGATGATATGGGATTGGGACTGTTTGATTAG 363 0.5758 MGVFTFVVRKSGAEWSAKQHSGDIEASADSTYDLQRKLVQAALAVDSSGGVQSSFSPVSPTSAVFQVIVGGAVFVGGGGGAVAAAPAGGAAAADAAPAAEKKEEKVEEESDDDMGLGLFD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1480 120 MobiDBLite consensus disorder prediction 106 120 - -
Gso5g1480 120 MobiDBLite consensus disorder prediction 92 120 - -
Gso5g1480 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 - -
Gso5g1480 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 IPR044252 GO:0003735|GO:0005840
Gso5g1480 120 Pfam 60s Acidic ribosomal protein 73 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1480 Gso-Chr5 38227611 38229204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1480 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 77.941 1.58e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1480 K02942 - gmx:100804776 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1480 5 38227611 38229204 Gso8g1108 8 10167758 10169210 GST