Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1464 ATGGACCCATCTACTTTTCGTCCAGCTGTAGTCATCGATAATGGCTCCGGGTATACGAAGATGGGGTTTGCTGGTAATGTTGAGCCGTGTTTTATTGCTCCGACAGTTGTTGCAGTTAATGAGTCGTTTCTGAATCAATCGAGGGGCTCTTCTAAAGGCAATTGGGTGGCCCAGCACAATGCTGGAATTATGGCGGATCTTGATTTCTTCATTGGGGATGAAGCACTTACCAAGTCTCGATCTAGTAGCACTTACAATCTCAGCTACCCGATTCAGCATGGCCAGGTTGAGAATTGGGATGCCATGGAGCGCTTCTGGCAGCAGTGCATTTTCAATTATTTGAGCTGTGATCCGGAGGATCACTATTTCCTCTTGACCGAGAGTCCATTGACTCCGCCTGAGAGTCGCGAGTATACTGGGGAGATCATGTTTGAGACTTTTAATGTGCCTGGACTTTACATTGGTGTGAATTCTGTGCTTGCTCTTGCAGCTGGATACACAACATCCAAGGTTGGTAATCGTTACACCCGAAAAAGATTGGGAATTATGTTGAATATAGAATTGGAATTGGATGATTAA 579 0.4525 MDPSTFRPAVVIDNGSGYTKMGFAGNVEPCFIAPTVVAVNESFLNQSRGSSKGNWVAQHNAGIMADLDFFIGDEALTKSRSSSTYNLSYPIQHGQVENWDAMERFWQQCIFNYLSCDPEDHYFLLTESPLTPPESREYTGEIMFETFNVPGLYIGVNSVLALAAGYTTSKVGNRYTRKRLGIMLNIELELDD* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1464 192 CDD NBD_sugar-kinase_HSP70_actin 10 164 - -
Gso5g1464 192 Pfam Actin 8 165 IPR004000 -
Gso5g1464 192 PANTHER BNAC05G09010D PROTEIN 7 173 - -
Gso5g1464 192 SMART actin_3 7 192 IPR004000 -
Gso5g1464 192 PANTHER ACTIN 7 173 IPR004000 -
Gso5g1464 192 Gene3D - 4 181 - -
Gso5g1464 192 SUPERFAMILY Actin-like ATPase domain 8 166 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1464 Gso-Chr5 38130166 38131715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1464 10 171 Cytoskeleton Gene Families AT5G09810 41.718 5.83e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1464 K18584 - gmx:100778870 396.356