Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1453 ATGCTTGGTGGGGCTTTGGCTTTGCATTCCAAAACCCAAATGGAAAACATGCATTGGTCACAGCATACACATTTAGTGGTACTGTTTTTCTTGGGAATGGTTCTAATACCTTCCGTGTGTCAAAGTGATTCAACTACAGCTGTTTACATTGTTACTCTGAGACAAGCTCCTGCTTCTCACTATCATCATCATGAGTTAATCACAGTGGGCAACAACTCTAAACATGGTTCATCTGGGAGAAGAAGAACTAGAGTTCACAAACAAAGACATCAGAATGTTTCAAAGCCAGTTATGAAACGTGGTTCGTACTTTGCCCGAGTTCACGACTCATTGTTGAATAAAGTGTTTAATGGGGAGAAATATCTGAAGCTCTATAGCTATCATTACTTGATTAATGGATTTGCTGTGCTGGTTACCCAACAACAGGCAGAAAAACTTTCAAGGAGAAGAGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTGAGAACTGCAACCACACACACTCCACAATTTTTGGGTCTGCCACAGGGAGCTTGGTTGCAAGCAGATGATAAATCTGAACATCCATTCCCCGTTCCTGCTCATTTCTCTGGCGCCTGTGAGGTTACGCCAGATTTTCCGTCCGGTTCTTGCAATAGGAAGCTTGTTGGGGCTAGACATTTTGCCGCTTCTGCTATAACCAGAGGAATATTTAACTCATCCCAGGACTATGCTTCTCCCTTTGATGGCGATGGCCACGGCACGCACACAGCTTCTGTTGCAGCCGGAAACCATGGAATTCCAGTGATTGTTGCTGGCCAAGTTTTTGGAAATGCTAGTGGGATGGCTCCTCATTCACACATTGCCATTTACAAGGCACTATACAAGAGATTTGGAGGATTTGCAGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATATGCTTGTCAATCACTCCTAATAGGCGTCCTTCTGGCATCGCAACTTTCTTCAATCCAATAGATATGGCATTGCTATCAGCTGTGAAAGCTGGTATTTTTGTAGTGCAAGCTGCTGGCAATACTGGACCATCACCTATGAGCATGTCCTCCTTCAGTCCATGGATTTTTACTGTTGGTGCCACCTCTCATGATCGAGTTTATAGCAACTCCCTATGTCTTGGAAATAATGTGACCATACCTGGTGTTGGACTTGCACCTGGAACATATGAGAACACGATGTTTAAACTGATTCATGCAAGACATGCTTTGAACAAAAACACAACAGTTACTGATGATATGTATATTGGTGAGTGTCAAGATGCAAGTAAGTTCAGTCAGGATTTGGTCCAGGGCAACCTCCTGATCTGTAGCTATTCAGTCCGATTTGTGCTTGGGCTCTCCACCATTCAACAGGCATTAGAAACAGCCATGAACCTTAGTGCAGTTGGTGTTGTTTTCTCCATGGACCTTTTTGTGACTGCTTTTCAGCTTAACCCAGTTCCTATGAAAATGCCTGGCATAATAATTCCATCTGCAAATGATTCCAAGATATTACTGCAATACTACAATTCTTCACTGCAAATAGATGGGGATTCAAATAAAATTGTTAAATTTGGGGCTGTTGCTAGCATTGGTGGTGGATTAGAAGCCAACTACAATAATGAGGCCCCAAAGGTTGTGTATTACTCTGCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCATGAAGCTGACATTATGAAACCCAATTTGGTAGCTCCTGGAAATTTTATATGGGCTGCTTGGAGTTCTGTTGCCACTGATTCTGTTGAATTTCTAGGCGAGAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAATTAAGCAACAGTTTCCCAATTTTAGTCCTGCAGCCATTGGATCTGCACTATCCACTACAGCTTCTCTGTATGACAACAATGGGAGGCCAATAATGGCTCAGCGATCATATCCCTCCATAGACCAAAACCTATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCAGCATTAAATCCGGGATTGCTTTTTGATTCTAGCTATGATGACTACATGTCATTCCTATGTGGTATCAATGGTTCAACTCCTACAGTGCTAAACTACACCGGTCAAAATTGCTGGACTTATAATTCAACACTATATGGCCCTGATCTGAACTTGCCCTCAATCACAATAGCAAGGTTGAACCAATCTAGAGTGGTACAAAGAATAATCCAAAACATTGCTGGAAATGAAACATACAATGTTGGTTGGAGTGCTCCATATGGCACTTCTATGAAAGTATCTCCTAATTATTTCTCTCTTGCAAGTGGGGAGAGACTTGTCTTGTCTGTGATCTTCAATGTAACCAACAACAGTTCTGCTGCTAGCTATGGGAGAATTGGGCTGTATGGTAATCAAGGTCACGTTGTCAACATTCCTGTGGCAGTCATTTTTAAAATCTTATAA 2490 0.4269 MLGGALALHSKTQMENMHWSQHTHLVVLFFLGMVLIPSVCQSDSTTAVYIVTLRQAPASHYHHHELITVGNNSKHGSSGRRRTRVHKQRHQNVSKPVMKRGSYFARVHDSLLNKVFNGEKYLKLYSYHYLINGFAVLVTQQQAEKLSRRREVSNVVLDFSVRTATTHTPQFLGLPQGAWLQADDKSEHPFPVPAHFSGACEVTPDFPSGSCNRKLVGARHFAASAITRGIFNSSQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGQVFGNASGMAPHSHIAIYKALYKRFGGFAADVVAAIDQAAQDGVDIICLSITPNRRPSGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGATSHDRVYSNSLCLGNNVTIPGVGLAPGTYENTMFKLIHARHALNKNTTVTDDMYIGECQDASKFSQDLVQGNLLICSYSVRFVLGLSTIQQALETAMNLSAVGVVFSMDLFVTAFQLNPVPMKMPGIIIPSANDSKILLQYYNSSLQIDGDSNKIVKFGAVASIGGGLEANYNNEAPKVVYYSARGPDPEDSLPHEADIMKPNLVAPGNFIWAAWSSVATDSVEFLGENFAMMSGTSMAAPHVAGLAALIKQQFPNFSPAAIGSALSTTASLYDNNGRPIMAQRSYPSIDQNLSPATPFDMGSGFVNATAALNPGLLFDSSYDDYMSFLCGINGSTPTVLNYTGQNCWTYNSTLYGPDLNLPSITIARLNQSRVVQRIIQNIAGNETYNVGWSAPYGTSMKVSPNYFSLASGERLVLSVIFNVTNNSSAASYGRIGLYGNQGHVVNIPVAVIFKIL* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1453 829 PRINTS Subtilisin serine protease family (S8) signature 242 255 IPR015500 -
Gso5g1453 829 PRINTS Subtilisin serine protease family (S8) signature 607 623 IPR015500 -
Gso5g1453 829 Gene3D - 702 826 - -
Gso5g1453 829 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 183 828 - -
Gso5g1453 829 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 31 183 - -
Gso5g1453 829 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 183 828 IPR045051 -
Gso5g1453 829 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 183 IPR045051 -
Gso5g1453 829 ProSitePatterns Serine proteases, subtilase family, serine active site. 608 618 IPR023828 -
Gso5g1453 829 MobiDBLite consensus disorder prediction 77 92 - -
Gso5g1453 829 Pfam Peptidase inhibitor I9 48 164 IPR010259 -
Gso5g1453 829 Gene3D - 377 545 - -
Gso5g1453 829 MobiDBLite consensus disorder prediction 69 92 - -
Gso5g1453 829 CDD PA_subtilisin_like 386 518 - -
Gso5g1453 829 Pfam Fibronectin type-III domain 731 824 IPR041469 -
Gso5g1453 829 Gene3D Peptidase S8/S53 domain 191 698 IPR036852 GO:0004252|GO:0006508
Gso5g1453 829 ProSiteProfiles Serine proteases, subtilase domain profile. 196 685 - -
Gso5g1453 829 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 37 162 IPR037045 -
Gso5g1453 829 SUPERFAMILY Subtilisin-like 202 689 IPR036852 GO:0004252|GO:0006508
Gso5g1453 829 Pfam Subtilase family 231 647 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1453 Gso-Chr5 38026242 38032960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1453 26 828 Subtilisin-like Serine Gene Family AT4G20430 64.846 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1453 - - gmx:100814065 1534.24