Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1450 ATGGATTTTTTCATGCAATCTTTGTTACTTACTTTGCTCACCTTGGTTGCATCTATCTTTGTTTTGCAGAAAAGAAGAAAACTACTAGTACTAGGTAGCACTAAAAGCTTGCCCCCAGGTAGCTTTGGGTGGCCCCTAGTGGGTGAAACCTACCAATTTTTGTTCAACAAGATTGAACATTTCCTTCAAGAGAGGGTTCAAAAGCACTCCTCAGAGATCTTCCACACACACATTCTTGGAGAGTCAACAGTAGTTCTTTGTGGCCCTGGAGCAAACAAATTTGTCTCCACCAATGAGACAAAGCTTGTCAAGGTCTCGTACATGAAAACTCAGCGCAGGTTCTTCATCATTCCTGATCAAAGACATGCACCTATGCCAAAACCAACACAAGAAGCTGCATCTGCTGCTCCTGTGAAGATCTTGGGGATTCTGAAACCTGAGGGAATATCTAGGTACATGGGGAACAAGATTGAATCCACCATGAACCAACATTTCATTACACACTGGGAAGGAAAAAAAGAAGTGAAGGTGTACCCCTTGGTGAAGGCCTTTTCCCTTACACTTGGATGCCAATTCTTCTTAGGAATTGATGGACCAAAATTTGCCAGTGAGTTTGAGAACTTGTATTTTGGTATCTATTCTGTTCCTGTGAATTTTCCAGGCTCCACATACCATAGGGCACTGAAGGCTGCAGCTGCTATAAGGAAAGAGATCCAAATTCTGATCAAAGAGAAGATCGATGCTTTGTCCAAGGGGCAAGTTGTGGATGACCTAATAGCACACGTAGTTGGTGCTGAGCAGGATGGAAAATATGTGCCAAGACTTGAAATAAGTAACATCATCATGGGGTTGATGAATTCCAGCCACATGCCAATAGCTACTACCCTGGCTTTCATGATCAAACACATTGGACAGAGGCCTGATATCTACCAAAAAATCTTATCCGAGCATGCTGATATTACAATATCCAAAGGATCCGGTACTGCACTAGATTGGAACAGCATACAGAAATTGAAATACACATGGGCTGTTGCACAAGAGACCATGAGACTCTACCCAACTGCACCAGGTGCATTCAGAGAGGCAATAACAGATATAACCTATGAAGGTTTTACTATTCCAAAGGGGTGGAAGATCTTTTGGGCATTTATTGGAACAAATAAGAATCCAAAGTACTTTCATGAACCTGAAAGTTTTGATCCCTCAAGGTTTGAAGGGAATGCTCCTGTTCCATACACTTGGTTACCCTTTGGAGCTGGACCAAGAACTTGCCCTGGAAAAGACTATGTACGGTTTGTGGTCCTCAATTTCATTCACATTCTCATAACCAAGTTCAAGTGGGAAGCTATACTTCCTGATGAGAAGGTTTCAGGTTCTTCGATACCTATCCCAGCAGAGGGAATTCCTATACGTCTTCATCACTACTAA 1428 0.4237 MDFFMQSLLLTLLTLVASIFVLQKRRKLLVLGSTKSLPPGSFGWPLVGETYQFLFNKIEHFLQERVQKHSSEIFHTHILGESTVVLCGPGANKFVSTNETKLVKVSYMKTQRRFFIIPDQRHAPMPKPTQEAASAAPVKILGILKPEGISRYMGNKIESTMNQHFITHWEGKKEVKVYPLVKAFSLTLGCQFFLGIDGPKFASEFENLYFGIYSVPVNFPGSTYHRALKAAAAIRKEIQILIKEKIDALSKGQVVDDLIAHVVGAEQDGKYVPRLEISNIIMGLMNSSHMPIATTLAFMIKHIGQRPDIYQKILSEHADITISKGSGTALDWNSIQKLKYTWAVAQETMRLYPTAPGAFREAITDITYEGFTIPKGWKIFWAFIGTNKNPKYFHEPESFDPSRFEGNAPVPYTWLPFGAGPRTCPGKDYVRFVVLNFIHILITKFKWEAILPDEKVSGSSIPIPAEGIPIRLHHY* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1450 475 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 Gene3D Cytochrome P450 31 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 12 473 - -
Gso5g1450 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Gso5g1450 475 PRINTS P450 superfamily signature 305 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 PANTHER CYTOCHROME P450 26 12 473 - -
Gso5g1450 475 SUPERFAMILY Cytochrome P450 35 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1450 475 Pfam Cytochrome P450 218 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1450 Gso-Chr5 37985150 37987539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1450 26 379 Cytochrome P450 AT5G36110 32.162 8.52e-66 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1450 K20667 - gmx:100782971 956.051