Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1432 ATGGGTAAGGGTCCCTTTTCCTTCCGCCGCTCCGCCTCTCGCCGCCGACCCAAGAAGACCGCCGCCCCGCCTCCTCCTCCGTCTCCGCCGCAGCCTCCCTACGCGGCCGGAATCGCCACCTCACCCGACGACAACAACAACCGTCTCATTGCTGCCGGCGCCGGCAGCAGCGCCTTGACGAAGGCGAAGAAGAAGACCGGCGGCGCCCGCTTGTGGATGAGGTTTGACCGGTCGGGCCGGTCAGAACTGGTGGAGTTGGAGAAGAACGCCATCATCCGCCACGCAGCGATTCCCGCTAGAGACCTGAGAATCTTGGGCCCCGTCTTCTCCCACTCCTCCAACATCCTCGCTAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTTATAAAGGCAATCGTGACTGCTGAAGAAGTGTTATTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAACTCAGGCAACAGCTTCCTGGGAAAAGTCAACCTAAACTTCTCGGCGGCGTGGAGGAACAGGAAGGCGAAATGCAGGTCTCTAATGGCAGGCAATGGTTGCCTATGCCGGAGGCGGCTGATGGTTTGCAGTCAGAGCTTCCGTTTGAGTTTCAAGTTCTGGAGATTGCTTTGGAGGCTGTGTGTACTTATCTGGACTCGAATGTGGCGGACCTTGAGCGAGGTGCTTACCCTGTGTTGGATGAATTGGCTCGGAATGTTAGCACCAAGAATCTTGAACATGTGAGGAGTTTGAAGAGTAATCTTACGCGGTTGCTGGCAAGAGTGCAGAAGGTGCGAGATGAAATTGAACATCTGTTAGATGACAACGAAGATATGGCACAACTATATTTGACGAGGAAGTGGTTACAGAATCAACAATTTGAGGAGGCTCATTTGGGTGCCACAACCTCAAATAACTTTCCTAATACCTCACGTTCTGTTCGTCGACTTGGTTCTAACAGAAGTGAAAGTCTTGTGACCTGCCATTATGAGGATGATAACAATGTGGAGGACTTGGAGATGTTGCTTGATGCATATTTCATGCAGTTGGATGGAACTCGTAACAAAATATTATCTGTTAGGGAGTATATTGACGACACTGAAGACTATGTCAACATTCAACTTGATAACCACCGAAATGAACTTATTCAGCTGCAGTTGACGTTGACTATTGCATCATTTGCTATTGCTATTGAAACTATGATTGCTGGTGCATTTGGTATGAACATTCCTTGTAACTTGTATCACATTGATGGAGTATTTTGGCCCTTCGTTTGGATCACGTCTGCAGCTTGCGTATTGCTTTTCTTGCTTATTTTAGCATATGCAAGATGGAAGAAGTTGCTGGGATCATAA 1356 0.4912 MGKGPFSFRRSASRRRPKKTAAPPPPPSPPQPPYAAGIATSPDDNNNRLIAAGAGSSALTKAKKKTGGARLWMRFDRSGRSELVELEKNAIIRHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPGKSQPKLLGGVEEQEGEMQVSNGRQWLPMPEAADGLQSELPFEFQVLEIALEAVCTYLDSNVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEEAHLGATTSNNFPNTSRSVRRLGSNRSESLVTCHYEDDNNVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETMIAGAFGMNIPCNLYHIDGVFWPFVWITSAACVLLFLLILAYARWKKLLGS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1432 451 Gene3D Magnesium transport protein CorA, transmembrane region 389 449 - -
Gso5g1432 451 CDD Mrs2_Mfm1p-like 72 448 IPR039204 -
Gso5g1432 451 Pfam CorA-like Mg2+ transporter protein 327 444 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso5g1432 451 Coils Coil 248 282 - -
Gso5g1432 451 MobiDBLite consensus disorder prediction 1 42 - -
Gso5g1432 451 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 387 439 IPR045863 -
Gso5g1432 451 Gene3D - 58 143 - -
Gso5g1432 451 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 5 451 - -
Gso5g1432 451 MobiDBLite consensus disorder prediction 19 36 - -
Gso5g1432 451 Gene3D Magnesium transport protein CorA, transmembrane region 145 382 - -
Gso5g1432 451 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 451 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1432 Gso-Chr5 37792474 37795938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1432 1 451 MRS2 Gene Family AT3G58970 66.593 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1432 K16075 - gmx:100812561 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1432 5 37792474 37795938 Gso8g1055 8 9761208 9764196 GST
Gso5g1432 5 37792474 37795938 Gso18g0101 18 827573 834902 PCT
Gso5g1432 5 37792474 37795938 Gso13g1521 13 30658844 30661485 PCT