Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1431 ATGGCAAATTCAAAGGGCTCATCAGGTTTCAGAAATTTTATGTATCCTGGAAAGCATCCTCTACTTCCTCCTAAAAGTCCGTTTCCTAGTGTTTCCCAAGCATATGCTGATTATGTCCCAAATCCTGCTGTTGGTTTAAAGGCTGGTAACAGACCTAGAGATGGAAACACACACCACCAACGTACTTCATCTGAGAGCCTCGTTATAGAGGAGCAGCCTTCATGGCTTGATGATCTCCTTAACGAGCCAGAGACACCTGTCCGAAGAGGTGGCCATCGGCGTTCATCAAGTGATTCTTTTGCGTACATAGACACTGTTAATGCATCTAACATTAATTATGCTAATCAGGACGAGTATAAATATAAGAATATGATGTCTATTCCGTCTTGGTCATCTCAAGACTTTGACCGCAGCAAAGATGCTCGTCATGTACCTGTTTATGCAGAAATGAACTCCGTAAAACAGAAAAATAGGTCATGGGACTCTTTTTCAAATGCCATGACAAATCCAGTTGGTGTTCCCTCAGGCAAAGACAGTGCTGCTTTTCAGAGTTCAGGATTGCAATGTACACCACATGAAGCAGATGGTCTTCCACCAGCATCAAGTGAAAAGCACGATTCAGTAGAATCAGGCTTACAGGATGCAAAACCATTTCCTGAAAAAAAGGACAGTTCACATGCAAAGTCATCTGCCTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTCCGGAAACTTCAATACATAGCTGAGCTGGAAAGGAATGTACAAGTTTTACAGGCAGAAGGGTCTGAAGTCTCGGCCGAGCTCGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAATATAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGCATTGTATCAGCAGCAGCAGCAACCACAGACACAGCCACAACAGCAACCATCTGGAAGTCACAGACGCACGAACAGTAGAGACCTCGAATCTCAGTTCGCAAACCTTTCTCTAAAACACAAGGACACCAATTCAGGGCAAGACCCTGCTCTCAGAATTTAG 1128 0.4335 MANSKGSSGFRNFMYPGKHPLLPPKSPFPSVSQAYADYVPNPAVGLKAGNRPRDGNTHHQRTSSESLVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNASNINYANQDEYKYKNMMSIPSWSSQDFDRSKDARHVPVYAEMNSVKQKNRSWDSFSNAMTNPVGVPSGKDSAAFQSSGLQCTPHEADGLPPASSEKHDSVESGLQDAKPFPEKKDSSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQVLQAEGSEVSAELEFLNQQNLILSMENKALKQRLENIAQEQLIKYLEQEVLEREIGRLRALYQQQQQPQTQPQQQPSGSHRRTNSRDLESQFANLSLKHKDTNSGQDPALRI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1431 375 MobiDBLite consensus disorder prediction 152 190 - -
Gso5g1431 375 Coils Coil 255 303 - -
Gso5g1431 375 MobiDBLite consensus disorder prediction 351 366 - -
Gso5g1431 375 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Gso5g1431 375 Gene3D - 237 289 - -
Gso5g1431 375 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Gso5g1431 375 MobiDBLite consensus disorder prediction 151 244 - -
Gso5g1431 375 PANTHER - 1 368 - -
Gso5g1431 375 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Gso5g1431 375 MobiDBLite consensus disorder prediction 326 344 - -
Gso5g1431 375 MobiDBLite consensus disorder prediction 326 375 - -
Gso5g1431 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 368 IPR044797 -
Gso5g1431 375 MobiDBLite consensus disorder prediction 43 70 - -
Gso5g1431 375 MobiDBLite consensus disorder prediction 198 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1431 Gso-Chr5 37782273 37786821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1431 71 307 bZIP Transcription Factor Family AT2G42380 32.411 2.33e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1431 - - gmx:100813098 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1431 5 37782273 37786821 Gso8g1054 8 9751270 9755856 GST