Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1422 ATGACACTAAATCTTATGGAGGTGACCAACCTTGTAGTCTTGCCAGCAGTTTCGGCATTCTTTGTCCTTTGTCTATATTTCATCATTAAAGTTTTCAGACTCGGGAAACATCCAAACCTCAATCTTCCTCCTGGAAGATTAGGATGGCCTGTTGTTGGAGAAACCTTGGAGTTTCTGCGCACAATGAATGAGGGCAACGTGTTAAGGTTCATACAAGAGAGAAAGGAGAAATATGACTCCAGGGTGTTCAAAACTTCAATGTTTGGAGATCCTGTTGTTCTGTTTTGCGGGCCAGCTGGGAACAAGTTCCTATTCAGTAATGAGAACAAGAATGTCCAAGTGTGGTGGCCTAGTTCGGTGAGGAGGTTGTTAAGGTTGTCCTTGGTTAATAAGGTTGGTGATGAGGCAAAGATGGTGAGAAGGTTGCTCATGAGCTTTCTTAATGCAGAAACACTCAGAAACTATTTGCCAAAAATGGATAGCATTGCTCAGCGCCATATAGATACATATTGGGAAGGAAAGGAGCAGGTGTGTGTCTATCCAATAGTACAACTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTGACCATATATCAAAGCTTTCGTTAAAATTTGATGAACTTCTGAAAGGGATCATTGGTTTTCCCCTCAACGTTCCTGGAACAAGGTTTTATCGGGCAATGAAAGCTGCAGATGTAATAAGGAAAGAAATTAAAATGATTCTAAAGAAAAGGAAAGTGGATTTGGAGGAGAAGAGGGTATCACCTACTCAGGACCTTCTATCACATATGCTTGTTACATCTGACCCCAGTGGAAGGTTTATGACTGAAATGGAGATTCTTGATAACATTCTTCTTCTACTTTTTGCCGGTCACGATACTTCTAGATCAGTGTTATCATTGGTCATGAAGTATCTTGGACAATTGCCTCAAGTTTATGAACATGTCTTGGAAGAACAACTTGAAATTAGTCAAGGGAAAGAGGCAGGGCAGTTGTTGCAATGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTCATGAGGCTGTCCCCACCTGTGAGTGGTGCTTACAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGGTGGAAGCTGCATTGGAACACTGGTTCATCACACAAGGACCCAACGCTCTTCTCGAATCCGGAAACTTTTGATGCTTCAAGGTTTGAAGGGGCAGGGCCTACACCCTTTTCATATGTTCCATTTGGAGGTGGCCCCCGAATGTGTTTGGGGCTAGAGTTTGCTAGACTAGAGATTCTTGTGTTCATGCATAATATCGTGAAACGGTTCAAGTGGGATTTGGTGATTCCTGATGAGATGTTCAAGTATGATCCCATGCTAGAACCAATAAAAGGACTTGCAATTCGACTTCATCCTTCCCATTTCTAG 1461 0.4162 MTLNLMEVTNLVVLPAVSAFFVLCLYFIIKVFRLGKHPNLNLPPGRLGWPVVGETLEFLRTMNEGNVLRFIQERKEKYDSRVFKTSMFGDPVVLFCGPAGNKFLFSNENKNVQVWWPSSVRRLLRLSLVNKVGDEAKMVRRLLMSFLNAETLRNYLPKMDSIAQRHIDTYWEGKEQVCVYPIVQLYTFELACCLFLSIEDSDHISKLSLKFDELLKGIIGFPLNVPGTRFYRAMKAADVIRKEIKMILKKRKVDLEEKRVSPTQDLLSHMLVTSDPSGRFMTEMEILDNILLLLFAGHDTSRSVLSLVMKYLGQLPQVYEHVLEEQLEISQGKEAGQLLQWEDVQKMKYSWNVASEVMRLSPPVSGAYREAIKDFTYADYNIPKGWKLHWNTGSSHKDPTLFSNPETFDASRFEGAGPTPFSYVPFGGGPRMCLGLEFARLEILVFMHNIVKRFKWDLVIPDEMFKYDPMLEPIKGLAIRLHPSHF* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1422 486 Pfam Cytochrome P450 43 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Gso5g1422 486 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 21 474 - -
Gso5g1422 486 Gene3D Cytochrome P450 34 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1422 486 PANTHER CYTOCHROME P450 26 21 474 - -
Gso5g1422 486 SUPERFAMILY Cytochrome P450 38 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1422 Gso-Chr5 37656392 37659676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1422 41 388 Cytochrome P450 AT5G36110 43.590 3.75e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1422 - - gmx:100778139 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1422 5 37656392 37659676 Gso8g1043 8 9615917 9619384 GST