Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1410 ATGTCTGGGCTTGAGGTTGTAGCCCCTCTTGTTGGAGAGGTAGGAGCGCATGGAATTGGAGAATTACATTCTACAATTGCATCTAAAATTGCGTCTTCCAGAAACCTTGATGACAACTACAACATTTTGCTCAAAGACATGGAGATGCTACTTGCAATAAAGAAGGATAAAGAGAGGGAGGTTCAAAGAAACAACCACAAAGATACCACTAATGCTTACAAACTGTGGACAAACAGGGTATCAGATGCTGCAGAAGATGTGCAGAAGCTGAAAGTTAAATACGAAGAGAAAATGCTACCCTGGTGGCGTATTCAACGGCGTTCACATCTGAGTGAAGAGATGGAGAAGAAGTGCAACTATGTTCGTGAACTTAAGAAGGATGAATGTTTAAGAGATTTTCTTGTTGATAAACCACCAGAGCCTGTCTTAAAGGAGTTAAATGTCCCACAGATAAGTGGATATCCAACCCTTCAAGGTGCCTTGAAAAATATGCTGGGTTTGCTAAAAAATAATAAGATTAAAGTCATTGGAGTGTGTGGAACAAAAGGGGTGGGGAAAACAACAATAATGCAGAACCTAAACAACAATGAAGAGGTTGCTAAACTGTTTGAAATTGTCATTTTTGTGAAAGCCACAGCTGATGACCATAAGCTTCAAGAGAAAATTGCTAATCGGTTGATGCTGGACATAGAAACCAACAAGAAGCATAGCGGTGATGTTGCAAGAAGAATACACAAAGAGCTAGAGAAGAAGAAGTATTTATTGATTTTGGATGAGGTTGAGGATGCCATCAATTTGGAGCAGTTGGGAATTCCTAGTCACGTCAACAATGGCGGTAAGGTAGTAATTGCCACTCGACTCCCTCGAGTTTATAAGTTGAATAAGGTGCAGAGGGTCATCAAAGTCATGGAGTTATCTCCTGAGGAAGCATGGAAGATGTTCAGAGATACTGTTCATGCCTTTAATCCTAAGATTGATTCCCTTGAAATTCAACCTATAGCCAAACTTGTATGCAAAAGGTGCTCTCGTCTTCCACTTCTTATTTACAATATAGCAAATTCTTTTAAATTGAAAGAGTCTGCTTCAAGTTGGTCGGCGGGACTTGAAGATCTTAAACCTTGGCCTGAACTTCAAAATCAAGGTTTAGAAGAGTTGTACTCATGCCTGAAATTCTGTTATGATGAACTCAAAGATAAAAAGAAGCAGAAATGCTTTTTATACACTTCACTGTATCCTGCAAATAGCAAGGTTTACACTGATTATTTAGTGGAGTGTTGGGCAGCACAAGGTTTACTCGGTGATATAAATGACAAAAGGTCATATCGAAGTGCACGCAATTGTGGTATTAACATATTAGAACATCTTGCTAATGTCTCTTTACTAGAGAAAGGGGAATCAATGATATATGTCAACATGAATCATTGTATGAGACAACTTGCATTACACATATCCTCTAAAGATCCTGAATGTAGCTTTTACCTCCAAGATGGTGAAGAATCTGAAAATCTCTCAAATTCAAGAGCTTGGCAGCAGGCTAGGTGGGTCTCTATGAGACAACTGCTTGATTTTCCAACAAGCCAAGATAGCAGCATGATTTTGACGTTGTTGCTGCGAAAAAATCCAAAACTAACTACAATACCACCAACTTTTTTTGAGAACATGAGCAGTCTACTTCTGTTAGACTTGTATAATAGCATGATTACACAACTGCCATCGTCTTTATCAAAATTGACTTGTCTACGGGGTTTATTCTTGAACAGTTGCGAGCTCTTGGAATCATTATCATCTGAAATTGGATCACTTCAATTTCTAGAGGTCCTTGACATACGAGATACTAAAGTAACATTCATACCTCTACAAATTGGATGTTTGACTAATCTAAGATGCCTGCGAATCCCATTCATTGTAAGTGAAGATAATGAAGCTCAAAATGTTCATGTGATTTCAAAGCTTCATAGGTTGGAAGAATTAACCATTCAAGTCATATCCTATGAACAATGGTGCAATGATGCTGAAAATGTTTTACAACATGTGGCTTCTTTGGAAAATGTAACACATCTCAGATGTTGTTTTCCCTCCTCAATCATTCTTGGAGAATTTCTTTCAAGAAGTAAATCATGGAGTTGTAAGCAGCAAAATTCATTTAGATTCTTTGTGGGATGCCAAAACTCAAGGCGACCTCAAATACTTGAATCTTTTGAGTATAAAATTACTAATTATTTGAGGTATTGCAATGGTGGACAGAAGGATGACTCGGCAATTATTGAGGTACTACCAAAAACTGATGCATTTGAATTAGTTTGCCATAAAGATATAAAAAAATTGACAAATTTTGCTGGCGTAGTGTGTTTGGAACGCATTCGTGGTCTTTTGATTACAAGATGCAACAAAGTTTTAACAATTGTGTCAGCGGATACAAGTAGCAACACCATGAATGGAATCCAAATAGAAACAAGAGTCATCTTACCAAATTTGGAGCAATTATATTTGGAAAATTTGCTCAATTTAAAATGTGTTTTTAGAGGTCCCTTGCACAGTGGAACCTTTTCCAGATTACAAACGTTGTCATTGAAGAATTGTCCTTCACTGAGTGACATTTTCAGCAATGGAGCAATTCAACATTTTTCAGAACTTCAAAATCTGAAACTTGAAGATTGTTCAAAAATTGAAGTACTTATCAGAGAAGAAGACATTGAAGGAGAAAGGGATGTGCTTCCAAAACTAGAAATACTTCTGCTGGTTAACTTGCCTAACTTCAAAACTATATGCTCAACTCATACATTGGCTTGGTCCTCTTTGGAGCTGTTAAGGATTCATAACTGTCCTAAGTTGAAAACTTTACCACTAGACAGTGACAATGCAGTCAACTTAAAGTCCATTAAAGGGCAGCAAGAGTGGTGGGATGAGTTGGAGTGGACAAACAACAAGGTGCGTCCCATCTTTGCTGCCTCCAATGAGTATTTTTCTTAG 2970 0.3774 MSGLEVVAPLVGEVGAHGIGELHSTIASKIASSRNLDDNYNILLKDMEMLLAIKKDKEREVQRNNHKDTTNAYKLWTNRVSDAAEDVQKLKVKYEEKMLPWWRIQRRSHLSEEMEKKCNYVRELKKDECLRDFLVDKPPEPVLKELNVPQISGYPTLQGALKNMLGLLKNNKIKVIGVCGTKGVGKTTIMQNLNNNEEVAKLFEIVIFVKATADDHKLQEKIANRLMLDIETNKKHSGDVARRIHKELEKKKYLLILDEVEDAINLEQLGIPSHVNNGGKVVIATRLPRVYKLNKVQRVIKVMELSPEEAWKMFRDTVHAFNPKIDSLEIQPIAKLVCKRCSRLPLLIYNIANSFKLKESASSWSAGLEDLKPWPELQNQGLEELYSCLKFCYDELKDKKKQKCFLYTSLYPANSKVYTDYLVECWAAQGLLGDINDKRSYRSARNCGINILEHLANVSLLEKGESMIYVNMNHCMRQLALHISSKDPECSFYLQDGEESENLSNSRAWQQARWVSMRQLLDFPTSQDSSMILTLLLRKNPKLTTIPPTFFENMSSLLLLDLYNSMITQLPSSLSKLTCLRGLFLNSCELLESLSSEIGSLQFLEVLDIRDTKVTFIPLQIGCLTNLRCLRIPFIVSEDNEAQNVHVISKLHRLEELTIQVISYEQWCNDAENVLQHVASLENVTHLRCCFPSSIILGEFLSRSKSWSCKQQNSFRFFVGCQNSRRPQILESFEYKITNYLRYCNGGQKDDSAIIEVLPKTDAFELVCHKDIKKLTNFAGVVCLERIRGLLITRCNKVLTIVSADTSSNTMNGIQIETRVILPNLEQLYLENLLNLKCVFRGPLHSGTFSRLQTLSLKNCPSLSDIFSNGAIQHFSELQNLKLEDCSKIEVLIREEDIEGERDVLPKLEILLLVNLPNFKTICSTHTLAWSSLELLRIHNCPKLKTLPLDSDNAVNLKSIKGQQEWWDELEWTNNKVRPIFAASNEYFS* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1410 989 PRINTS Disease resistance protein signature 175 190 - -
Gso5g1410 989 PRINTS Disease resistance protein signature 247 261 - -
Gso5g1410 989 PRINTS Disease resistance protein signature 341 355 - -
Gso5g1410 989 PRINTS Disease resistance protein signature 847 863 - -
Gso5g1410 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 407 IPR027417 -
Gso5g1410 989 Gene3D Ribonuclease Inhibitor 497 723 IPR032675 -
Gso5g1410 989 Gene3D Ribonuclease Inhibitor 766 979 IPR032675 -
Gso5g1410 989 SMART AAA_5 172 307 IPR003593 -
Gso5g1410 989 Pfam Leucine rich repeat 534 590 IPR001611 GO:0005515
Gso5g1410 989 Gene3D - 304 397 IPR042197 -
Gso5g1410 989 SUPERFAMILY L domain-like 516 949 - -
Gso5g1410 989 Pfam NB-ARC domain 167 395 IPR002182 GO:0043531
Gso5g1410 989 PANTHER DISEASE RESISTANCE PROTEIN RP 31 885 IPR044974 GO:0006952
Gso5g1410 989 Gene3D - 144 302 IPR027417 -
Gso5g1410 989 PANTHER - 31 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1410 Gso-Chr5 37537274 37542400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1410 173 305 WRKY Transcription Factor Family AT4G12020 25.714 3.65e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1410 - K13459 gmx:102661619 1905.57