Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso5g1377 | ATGGCTTCGGCGGCCATATTCTCGTCGCTACGGCGGCGCCGGTCTCCGTCGCTGGAGGCGTTTCTGGTGCCGGTCGACCTCTCCGACGTGGCGCTGCTGGAGACTCTTATCTCCGTCGCCAGCGACGTCGCGTCCTGCTTCTCCGGCCACCGGTTCCCCTTCCAGCGCCGGAACTCGCGTGCCCTCATCGGAAAAGTTGAGATTTTCCGGTCAATGTTGGAGTGTCTGAGAGACTCCGCTGCCGCCGGAGCTCTTACTCCGACGGCGGTGCTGTGCTTAAAGGAGTTCTACCTGCTTCTATATCGCTCAAAGATTCTTCTTGATTACTGTGCCCAATCGAGCAAGTTGTGGCTGCTGCTTCAGAACCATTGTGTTTCTGGTCACTTCCATGATCTGAGCCAAGAATTTTCGACCCTTTTGGATGTTTTTCCCGTTGGGGAAGTTGGCCTCAGTGATGATGTTAGGGAACAGATTGAGTTGTTGCAGAGACAATCCAAAAGGGCTAAGTTGTTCATAGATAAGAAAGATGATGTTCTTAGGACAAGGTTCTTTTGGTTTCTCGAAGAGTTTGAGAGTGGGAGGGTTCCTGATTCTAAGGACTTGAGGTGTTTCTTTGTGGATAAACTGAGGATTCTTGATGCTAAGAGTTGTAGGGTGGAGATTGAAGCCTTGGAGGAGCAGATTGTGAACCACGAGGGTGATGTTGAGCCAACGGTTCCTGTGCTTAATGGGATGGTGGCTATCACAAGGTATTGCAGGTTTTTGTTGTTTGGGTTTGAGGAAGAGTTGGAAATTGAGATTCAAAAGAAGGGGAGGAAGAGGTTGATTGCTCAGGAAATTGCTGAAACGTTTTTGACTGTTCCTAAGGACTTTTGTTGTCCGATATCATTGGATTTGATGTGTGATCCTGTGATAATTTCCACGGGTCAAACTTATGATAGGAGGTCTATATGGAGGTGGATGGAGGAAGGGCATTGTACTTGTCCAAAAACGGGGCAATTGCTTTCTCATAATAGGCTTGTTCCTAATCGTGCTCTTAGGAATATGATTATGCAGTGGTGCAGTGCACATGGAGTACCCTATGATCCACCTGAGGGGGTTGATGCATCTGTTGAGATGTTTGTATCAGCTTGTCCCTCCAAAGCTTCCCTCGAAGCTAACCGAGGGGCGACCATGCTTCTCATTCAGCAGCTTGCGGATGGGTCACAAGCTGCACAGACTGTGGCTGCTAGGGAGATAAGATTGTTGGCCAAAACTGGAAAGGAAAACCGTGCCTTCATCGCGCAGGCCGGGGCAATTCCTCATCTTAGGAACTTGCTTTCCTCACCTAATGCTGTTGCACAGGAGAATTCTGTGACAGCACTGCTCAACCTATCCATTTTTGAAAGAAATAAAAGCATGATCATGGAGGAGGAAGGGTGTTTGGGGTCAATAGTTGAGGTGTTGCGATTCGGGCATACAACTGAGGCAAGGGAGAATGCTGCTGCAACATTGTTCAGCCTCTCTGCTGTCCATGATTATAAGAAAAGAATTGCGGATAATGTGGGGGCTGTTGAAGCACTGGCTTGGTTGTTGCAAGAGGGGACTCAAAGAGGAAAGAAGGATGCTGTCACAGCATTGTTTAATCTCTCCACTCACACTGAGAATTGTTTGAGAATGATAGAGGCAGGGGCGGTGAAAGCTATGGTTGTGGCTTTGGGGAATGAAGGAGTTGCTGAGGAAGCAGCTGGTGCCTTGGCCTTGATTGTTCGGCAGCCTGTTGGCGCCATGGCGGTGGTGAGGGAGGAAGCAGCAGTAGCCGGATTGATAGGAATGATGCGTTGTGGAACGCCGAGAGGTAAAGAGAATGCAGTTGCAGCATTGTTGGAGCTGTGCAGGAGTGGAGGTGCAGCTGCAACTGAAAGAGTGGTTAGGGCGCCGGCTTTGGTTGGATTGCTTCAAACCTTGCTCTTTACAGGTACAAAGAGGGCAAGAAGAAAGGCAGCTTCACTAGCTAGAGTGTTTCAGAGATGTGAAAATGCATCTCTCCATTATGGTGGATTAGGTGTAGGTTATTCATTTGCTAGCGATTCAGCTTCAACCAGAAATACTACAACCTTTGTGAGTGACGTTTCACTTCCAATGTCCATTTCTGTTCCTGTTTTATAG | 2148 | 0.486 | MASAAIFSSLRRRRSPSLEAFLVPVDLSDVALLETLISVASDVASCFSGHRFPFQRRNSRALIGKVEIFRSMLECLRDSAAAGALTPTAVLCLKEFYLLLYRSKILLDYCAQSSKLWLLLQNHCVSGHFHDLSQEFSTLLDVFPVGEVGLSDDVREQIELLQRQSKRAKLFIDKKDDVLRTRFFWFLEEFESGRVPDSKDLRCFFVDKLRILDAKSCRVEIEALEEQIVNHEGDVEPTVPVLNGMVAITRYCRFLLFGFEEELEIEIQKKGRKRLIAQEIAETFLTVPKDFCCPISLDLMCDPVIISTGQTYDRRSIWRWMEEGHCTCPKTGQLLSHNRLVPNRALRNMIMQWCSAHGVPYDPPEGVDASVEMFVSACPSKASLEANRGATMLLIQQLADGSQAAQTVAAREIRLLAKTGKENRAFIAQAGAIPHLRNLLSSPNAVAQENSVTALLNLSIFERNKSMIMEEEGCLGSIVEVLRFGHTTEARENAAATLFSLSAVHDYKKRIADNVGAVEALAWLLQEGTQRGKKDAVTALFNLSTHTENCLRMIEAGAVKAMVVALGNEGVAEEAAGALALIVRQPVGAMAVVREEAAVAGLIGMMRCGTPRGKENAVAALLELCRSGGAAATERVVRAPALVGLLQTLLFTGTKRARRKAASLARVFQRCENASLHYGGLGVGYSFASDSASTRNTTTFVSDVSLPMSISVPVL* | 716 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso5g1377 | 715 | PANTHER | U BOX DOMAIN-CONTAINING | 11 | 692 | - | - | |
| Gso5g1377 | 715 | Pfam | U-box domain | 287 | 357 | IPR003613 | GO:0004842|GO:0016567 | |
| Gso5g1377 | 715 | Coils | Coil | 214 | 234 | - | - | |
| Gso5g1377 | 715 | SUPERFAMILY | ARM repeat | 390 | 668 | IPR016024 | - | |
| Gso5g1377 | 715 | SMART | Ubox_2 | 290 | 353 | IPR003613 | GO:0004842|GO:0016567 | |
| Gso5g1377 | 715 | SUPERFAMILY | RING/U-box | 276 | 361 | - | - | |
| Gso5g1377 | 715 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 286 | 361 | IPR013083 | - | |
| Gso5g1377 | 715 | CDD | RING-Ubox_PUB | 291 | 333 | IPR045210 | - | |
| Gso5g1377 | 715 | SMART | arm_5 | 505 | 545 | IPR000225 | GO:0005515 | |
| Gso5g1377 | 715 | SMART | arm_5 | 546 | 584 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso5g1377 | 5 | 37241987 | 37244724 | Gso8g0998 | 8 | 9245373 | 9248053 | GST | |
| Gso5g1377 | 5 | 37241987 | 37244724 | Gso15g0732 | 15 | 6613907 | 6616734 | PCT | |
| Gso5g1377 | 5 | 37241987 | 37244724 | Gso11g2539 | 11 | 41442083 | 41444966 | PCT | |
| Gso15g0732 | 15 | 6613907 | 6616734 | Gso5g1377 | 5 | 37241987 | 37244724 | PCT | |
| Gso11g2539 | 11 | 41442083 | 41444966 | Gso5g1377 | 5 | 37241987 | 37244724 | PCT |
Showing 1 to 5 of 5 entries