Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1365 ATGGATAGCAAGTTCAGAAAAAAGAACCGCAACGTTAACTCATATACCAGTGAACAAGATCAAGACACTGATATAGCTCAAGAAAACCTTGCCGAGTCCCCTCCTTCTTCCACTGTGTTCAACATCGATGGCTTAGTCCCCTCCCCCACTTCCTCATCAAAGAGAAGGAGGGCAATACAGAAAAGGGTGGTGCAAATCCCAATGAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAGCAACACCCCACCCTCGGATTCATGGGCATGGAGAAAGTACGGCCAGAAACCCATCAAGGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGGTGTCCGGCACGGAAACAAGTGGAAAGGAGCTGCGTGGACCCCACGATGCTAGTCGTCACTTACTCCTCCGACCACAACCATCCCTGGCCACCTTCTAGAAACCACGCCAGGCCCACCAAAAAACCTGAACCGGTTCCGGACCCGGTCGAACCGGAGGAGAAGTTCGCGGACGAGTCCATGATAACAACCGCGGAAGAATTGGGGTGGCTGGGGGAGATGGAAGCGACGTCGTCCACGGTTCTCGAAAGCCCGTTTATGGCTACGACGTACCATGCTGACGTGGCGCTGATTCCGATGAGGGAGGAGGACGAGTCGCTCTTCGCCGACCTCGGAGAGCTGCCGGAGTGCTCGGTAGTGTTCCGGCAGGGGCTGCTGGCGGAGCGGCGGCGGTACACGGCGCCGTGGTGTGGGACCACAAGTTGA 768 0.5599 MDSKFRKKNRNVNSYTSEQDQDTDIAQENLAESPPSSTVFNIDGLVPSPTSSSKRRRAIQKRVVQIPMKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPPSRNHARPTKKPEPVPDPVEPEEKFADESMITTAEELGWLGEMEATSSTVLESPFMATTYHADVALIPMREEDESLFADLGELPECSVVFRQGLLAERRRYTAPWCGTTS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1365 255 MobiDBLite consensus disorder prediction 138 166 - -
Gso5g1365 255 Pfam WRKY DNA -binding domain 86 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso5g1365 255 Gene3D WRKY domain 73 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso5g1365 255 ProSiteProfiles WRKY domain profile. 85 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso5g1365 255 MobiDBLite consensus disorder prediction 1 95 - -
Gso5g1365 255 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 239 IPR044810 GO:0003700
Gso5g1365 255 MobiDBLite consensus disorder prediction 14 54 - -
Gso5g1365 255 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 2 239 - -
Gso5g1365 255 MobiDBLite consensus disorder prediction 151 166 - -
Gso5g1365 255 SUPERFAMILY WRKY DNA-binding domain 82 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso5g1365 255 SMART WRKY_cls 84 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1365 Gso-Chr5 37163858 37165641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1365 21 237 WRKY Transcription Factor Family AT1G29280 55.882 3.83e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso5g1365 WRKY 5.4e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1365 5 37163858 37165641 Gso8g0987 8 9150196 9152173 GST