Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1361 ATGAAGAATTGTGATGAATGGAAACCTTTCCTAGTAATGATAGCAATAGATTTTTCTTTAACCATGGTGAACATTCTGCTTAAGAAAGTCCTTCAAGAAGGAATGAACCATTTGGTTTTTATCACATATCGTCTGTCAGTTGCTACTATATTTTTGGCCCCCATCGGCTACTTTAAGGAGAGAAATGGAAGACCACGGCTCACATTGCAAATTTTATGCTACCTTTTCTTCAGTGCCATTATTGGGGCATCCGTCACACAATACTTCTTCCTTCTGGGGATCCAATACACCTCAGCTACCTTTGCTTGTGCCTTTGTTAATATGGTCCCGGTGATCACATTCATTATGGCATTACCATTTGGATTAGAAACTGTGAACATTAAATGCAAAGGTGGGAAAGCGAAGATTCTTGGTACATTTGTGTGCATAGGAGGGGCATTGTTGTTGACACTTTACAAAGGAAAGGCCTTGTTTGATGGCTCTCACCATCAATCTGCAGTAGCCATGAGATCTGCAATGGACCAAGCTTCTTCTACTACTAGAACAACACAGAAATGGACCATTGGTGTAATAGCTTTGATTATGGGAACCCTTTTTTGGTCTTTTTGGTTTATTTTACAGTCAAAGATAGGGAAGAGATATCCTTGCCAGTATTCTAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTCTCCACTGGCAGCAGCAACTTGTCCTCGTGGGTTCTCAAGGATAAGATACAAATAATCACCGTTCTTTATTCAGGGATAGTTGGGTCAAGTGTGTGCTATGTGGGCATGTCATGGTGCGTAAAGAAGAGGGGTCCGGTCTTTACCGCTGCATTCAGCCCTCTTGTTCAGATAATGTCCGGCATGATTGATATCCCCTTCTTGCACGAGCAGCTTCATCTTGGAAGTGTGGTGGGATCCATGTTGGTGATGATCGGGTTGTACATTCTTCTCTGGGGCAAAAGCAAAGATATGATGCAGAATAATGGCGCTACTAAGTTCGCTCAAGAAGTTGAAGAAACCAAAGAACAAGAGCCACAAGTATAA 1074 0.4227 MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVATIFLAPIGYFKERNGRPRLTLQILCYLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCKGGKAKILGTFVCIGGALLLTLYKGKALFDGSHHQSAVAMRSAMDQASSTTRTTQKWTIGVIALIMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGFSTGSSNLSSWVLKDKIQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPFLHEQLHLGSVVGSMLVMIGLYILLWGKSKDMMQNNGATKFAQEVEETKEQEPQV* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1361 357 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020|GO:0016021
Gso5g1361 357 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Gso5g1361 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Gso5g1361 357 PANTHER WAT1-RELATED PROTEIN 9 353 IPR030184 GO:0016021|GO:0022857
Gso5g1361 357 PANTHER WAT1-RELATED PROTEIN 9 353 - -
Gso5g1361 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1361 Gso-Chr5 37095168 37097851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1361 7 261 Nodulin-like Gene Family AT3G30340 50.980 2.73e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1361 - - gmx:100791663 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1361 5 37095168 37097851 Gso8g0984 8 9093236 9095965 GST
Gso5g1361 5 37095168 37097851 Gso15g0726 15 6537146 6539924 PCT
Gso5g1361 5 37095168 37097851 Gso11g2550 11 41541867 41544947 PCT
Gso15g0726 15 6537146 6539924 Gso5g1361 5 37095168 37097851 PCT
Gso11g2550 11 41541867 41544947 Gso5g1361 5 37095168 37097851 PCT