Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1337 ATGGCTTCTCCTGGTGGAAGTGGAACCTATTCATCTGGTTCCAGTTCTCTTCAAAACTCTGGTTCTGAAGGAGACAGAGACATCATGGAACAGAGGAAGAGGAAGAGAATGTTGTCCAATAGGGAATCGGCTCGTAGATCGAGGATAAGGAAACAGCAGCACCTGGAAGGTCTGAGTGCCCAATTGGATCAGCTTAAAAAGGAGAACGCACAAATCAACACAAACATAAGCATCACGACGCAGATGTACCTCAAGGTGGAAGCTGAGAACGCGATTCTGAGGGCTCAAATGGGGGAACTGAGCAACAGATTGAACTCTCTGAACGAAATGATAAGTTTCATTAACTCCACCAACAGCAACTGCTTGATGATGTTCGATGAGGCACAGGAGACGACCACTCAGTTGTTCAATGATTGTGGCTTCATGGATTATGCTTGGAATGGAATACCAATCATGGCTTCCGCTGACAATGAAATGTTGATCATGTATTGA 492 0.4512 MASPGGSGTYSSGSSSLQNSGSEGDRDIMEQRKRKRMLSNRESARRSRIRKQQHLEGLSAQLDQLKKENAQINTNISITTQMYLKVEAENAILRAQMGELSNRLNSLNEMISFINSTNSNCLMMFDEAQETTTQLFNDCGFMDYAWNGIPIMASADNEMLIMY* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1337 163 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 1 159 - -
Gso5g1337 163 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Gso5g1337 163 Coils Coil 48 110 - -
Gso5g1337 163 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 159 - -
Gso5g1337 163 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
Gso5g1337 163 CDD bZIP_plant_GBF1 33 83 IPR045314 GO:0003700|GO:0006355
Gso5g1337 163 MobiDBLite consensus disorder prediction 1 24 - -
Gso5g1337 163 SUPERFAMILY Leucine zipper domain 32 85 IPR046347 GO:0003700|GO:0006355
Gso5g1337 163 Pfam bZIP transcription factor 31 87 IPR004827 GO:0003700|GO:0006355
Gso5g1337 163 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 77 IPR004827 GO:0003700|GO:0006355
Gso5g1337 163 MobiDBLite consensus disorder prediction 1 53 - -
Gso5g1337 163 Gene3D - 30 86 - -
Gso5g1337 163 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1337 Gso-Chr5 36865318 36866640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1337 28 156 bZIP Transcription Factor Family AT4G34590 53.731 5.11e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso5g1337 bZIP_1 5.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1337 K25786 - gmx:778140 291.582