Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1327 ATGGATTTCCAAGTCGTCGTTCTCGGCGGTGGCGTCTCCAAGAAGCTCATCCCTCTCGTTTCGCAGGAGCTTCCGAACGCGTTGCTTCCGTTGGCGAATCGCCCCGTTCTCTCCTACGTTCTCGAGTACTTGGAGCTTAGCAACCTCAAAGATCTCATTGTGGTGGTCGAAGGCGAAGAAGCGGCTCTTCATGTTGGGGCTTGGATTTCGGGGGCTTATGCTGATCGCCTCCACGTTGAGGTTGCTGCAGTTCCTGAGGATGTGGGGACAGCGGGTGCAATTCGGGCCATTTCACATCACCTAACTGCTAAAGACATTTTGGTTGTCAGTGGTGATCTTGTTACTGATGTGCCACTTGGTGCTGTTGCAGCTACTCATAGACGGCATGATGCAGTTGTCACTGCTATGCTTTGCTCTGCTCCTGTAAGTGGACCTTTGGAGTCAGTATCCTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATGATTTGATAGGGCTGGATCCCACAAAACAGTTTTTAGTTCACATAGCAACTGGAGCAGAAGTTGAAAAAGATCTTCGAATTCAGAAGAGCATGCTCCCTGCAGTTGGCCAGATAGAAATAAGAGCTGATCTAATGGACGCCCACTTGTATGCATTCAAAAGATCAGTTCTACAAGAAGTTCTAGATCAGAAGAGTGCATTTCATAGCTTAAAGCATGATGTACTGCCATATCTAGTCCGGAGCCAACTGAAATCAGAAGTATTATTAAATGGCATACCACAAGCAGAAGAAAACAGAACTGAAAAGGTTATTTCTCAAAGCAATCAACAAATGCTATCTCAAATACTCGCTAATGCATCTGAACCAACCTTTCATCTACGACATGCACTGGGTCCTTATGGTTCTACTTTTGATCGAAGAACCCACAAATGTTGTGTGTATATTGCTGGAAGCAGCAAATACTGTGCTCGCTTAAATTCTATACAAGCATACACTGACATTAACCGTGATGTGATAGGAGAGGCTAGTCGCTTATCAGGGTATTCCTTCTCTACTCTAAACAACATTATCCATCCTTCTGCAGAGCTTGGGGCAAAAACAACAGTTGGACCACATTGTATACTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGGTCTGTCATTGGCCGTCATTGTCGGATTGGTGCTAATGTTAAGGTTGTTAATTCAGTAGTTATGAATCATGTTACTATCGGAGAATCTTGTTCAATCCAAGGTTCTGTTATCTGCAGCAACGTACAGCTCCAAGAACGTGCTGTACTAAAAGATTGCCAAGTTGGAGCAGGTTTTGTGGTCACTGCTGGTAGTGAGTGCAAGGGGGAGGTCTTGGCAAAGAAATGA 1380 0.4543 MDFQVVVLGGGVSKKLIPLVSQELPNALLPLANRPVLSYVLEYLELSNLKDLIVVVEGEEAALHVGAWISGAYADRLHVEVAAVPEDVGTAGAIRAISHHLTAKDILVVSGDLVTDVPLGAVAATHRRHDAVVTAMLCSAPVSGPLESVSSGGKDKTKKPGRYDLIGLDPTKQFLVHIATGAEVEKDLRIQKSMLPAVGQIEIRADLMDAHLYAFKRSVLQEVLDQKSAFHSLKHDVLPYLVRSQLKSEVLLNGIPQAEENRTEKVISQSNQQMLSQILANASEPTFHLRHALGPYGSTFDRRTHKCCVYIAGSSKYCARLNSIQAYTDINRDVIGEASRLSGYSFSTLNNIIHPSAELGAKTTVGPHCILGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSVVMNHVTIGESCSIQGSVICSNVQLQERAVLKDCQVGAGFVVTAGSECKGEVLAKK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1327 459 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 345 IPR029044 -
Gso5g1327 459 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Gso5g1327 459 CDD LbH_eIF2B_gamma_C 370 450 - -
Gso5g1327 459 Pfam Nucleotidyl transferase 6 141 IPR005835 GO:0009058|GO:0016779
Gso5g1327 459 Gene3D Hexapeptide repeat proteins 348 456 - -
Gso5g1327 459 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 459 - -
Gso5g1327 459 CDD eIF-2B_gamma_N 3 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1327 Gso-Chr5 36763935 36767775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1327 3 450 Eukaryotic Initiation Factors Gene Family AT2G34970 22.574 3.76e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1327 K03241 - gmx:100783346 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1327 5 36763935 36767775 Gso8g0946 8 8724706 8728725 GST