Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1310 ATGAATTTAAGTGCAAATGAGACTCTATTCTTGTCTGTTGATAAAATCAAAATTTTCACCTATAATGTGTGCACTGTTGCTCCACCCAATATTGTTTCAGATGGCTTATGGGGTGGCCAACTTAATGGACGGACTCCATTCAAATCTTCACTCCCATTGTTTGAGTTGCAGGTGCTTGTAATTTTTGCTATCACCCAAATCTGCCAATTCCTCTTACAGAGCTTTGACTTCCCTCAATTTATTCCACAAATGATAGTTGGCCTGATTCTAGGCCCTGCTGTTCAGGTAGAGATGCTGGACAAATACAAAAGGAAGTTGTTTCCATTTCCAAGTCAGGACACACTTGCAACAATATCATCAATTGGTTATGCACTTTTCATCTTTACAAGTGGTGTGCAAATGGATTTGAGCATGATAACCAGGACAGGACACAGGGCATGGGCCATTGCTATTATTGGATTGGCTGTGCCGATACTTATTTGTATTCCAACCATAATCAGCATTGAACGTTTAAGTCTTCCTGTTGAATATCAAATCTTTAATGCTACTGCTATAGTTCTACCAGAAACTGTAATTTCATTTGCAGTAGTTGCTTCCCTCCTCAATGAACTTAAAATCCTTAACTCTGAACTTGGCAGGTTGGCGTTATCCTCAGTACTGGTGAGTGACATATTAAGCAAAACCATTATATGCGTTGCCAGTATCTTTATGGATGCCAACGAAAACCAGAATATTTTTGTGCTCTTGGTATCATTGATTGCCTTTGGCATCTTTGTTCCATTATTTTTTCGACCAGCAATGTTTTGGATCATCAAACGTACTGCAGAAGGAAGACCTGTGAATGATGGTTATGTCTATGCTGTCATCACAATGGTATTTGCATTAGGTTGGGTTGCAGTTCAAATACATCAAGAATTCATCCTAGGAGCTTTTATGTTGGGGTTGGCTGTGCCAGAAGGACCTCCATTAGGATCTGCATTGGTCAAGAAGCTTCACTTCTTTGGTAACTGTTTCTTCTTGCCAATATTTGTCACTTGCAGTATGATGAAGGCAGATTTTTCCAAGCACTTTTCATCAAAAGTAGTTATGATCACTGCTTTCAGCTCTCTTTTCATTCACCTTGTCAAAGTAATAGCATGCACTATACCTGCCCTCTTTTGCAAGATTCCCTTCAAAGATGCCTTGACTCTTGGCCTCATTTTGAACGTTAAAGGCGTAGTGGAAGTCGGCATCTATGGTATCTTATATGACGAAGGGATTATTAATGGTCCTACTTATGGAGTAATGATGATCAACATAATGGTCATTGCAAGCATAGTGAAATGGTCTGTGAAACTATTGTATGATCCATCAAGAAAATACGCTGGCTACCAGAAAAGGAACATAGCGAGTTTAAAACCAGACTCGGAGCTGAGAGTAGTTGCCTGCCTTCATAAAACACACCATGTATCTGTTGTGAAAGATTTCCTTGACCTTTGTTGTCCAACAACAGAAGACCCCATCACTGTGGATGCATTGCATCTAATTGAGCTAGTCGGAAGGGCCTCTCCCATTTTCATTTCCCATCGCATTCAAAGAACGATTTCATCAAGTGGCCACAAGTCTTATTCAGATGATGTCATTCTTGCTTTTGACCTCTATGAACATGACAACATGGGTGCAGTAACTGCACACGTTTACACAGCCATATCTCCACCCTCCCTGATGCATGAGGATGTTTGTCATTTAGCATTGGACAAAGTGGCATCTATTATAATTCTTCCATTCCATCTAAGATGGTCTGGTGATGGTGCCATAGAATCTGATGACAAGAACATGAGGGCTTTAAATTGTAAGCTCTTAGAAATAGCTCCATGCTCAGTTGGAATCCTTGTTGGTCGTTCTACCATTCATAGTGACTCATTCATTCGGGTAGCAATGATTTTTCTGGGCGGAAAAGATGACCGAGAGGCTTTGTGCTTAGCCAAACGAGCAACGAGGAATCCAAGGGTCAACTTGGTTGTGTACCACCTTGCTCCTAAGGAACACACACCAGACATGGAGTATATACGAGATAATGAGGCACTAAAACATGTTAAGAAACCACACTTGGGAAATGTAAGTTATCAAAAAGTCATAGTGAATGGTGGACCAGAGACATCTCTTCTTCTTCGCCAAATAGTAAATGAACATCACTTTTTCATAGTTGGGAGAACACATGAGTTAAACTCACCTCAGACGGTTGGGCTTACAACTTGGATTGAATTTTCAGAGCTAGGTGTCATTGGTGATTTGCTTGCTTCATCAGATTTTGAAAGCAGACCGTGTGTTTTGGTAGTGCAGCAACAAGTAAAAGAAACATCATAG 2346 0.4045 MNLSANETLFLSVDKIKIFTYNVCTVAPPNIVSDGLWGGQLNGRTPFKSSLPLFELQVLVIFAITQICQFLLQSFDFPQFIPQMIVGLILGPAVQVEMLDKYKRKLFPFPSQDTLATISSIGYALFIFTSGVQMDLSMITRTGHRAWAIAIIGLAVPILICIPTIISIERLSLPVEYQIFNATAIVLPETVISFAVVASLLNELKILNSELGRLALSSVLVSDILSKTIICVASIFMDANENQNIFVLLVSLIAFGIFVPLFFRPAMFWIIKRTAEGRPVNDGYVYAVITMVFALGWVAVQIHQEFILGAFMLGLAVPEGPPLGSALVKKLHFFGNCFFLPIFVTCSMMKADFSKHFSSKVVMITAFSSLFIHLVKVIACTIPALFCKIPFKDALTLGLILNVKGVVEVGIYGILYDEGIINGPTYGVMMINIMVIASIVKWSVKLLYDPSRKYAGYQKRNIASLKPDSELRVVACLHKTHHVSVVKDFLDLCCPTTEDPITVDALHLIELVGRASPIFISHRIQRTISSSGHKSYSDDVILAFDLYEHDNMGAVTAHVYTAISPPSLMHEDVCHLALDKVASIIILPFHLRWSGDGAIESDDKNMRALNCKLLEIAPCSVGILVGRSTIHSDSFIRVAMIFLGGKDDREALCLAKRATRNPRVNLVVYHLAPKEHTPDMEYIRDNEALKHVKKPHLGNVSYQKVIVNGGPETSLLLRQIVNEHHFFIVGRTHELNSPQTVGLTTWIEFSELGVIGDLLASSDFESRPCVLVVQQQVKETS* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1310 781 PANTHER EXCHANGER, PUTATIVE-RELATED 12 779 - -
Gso5g1310 781 Pfam Sodium/hydrogen exchanger family 60 435 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso5g1310 781 Gene3D - 54 455 IPR038770 -
Gso5g1310 781 PANTHER CATION/H + ANTIPORTER 12 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1310 Gso-Chr5 36626653 36630448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1310 23 773 Antiporter Super Family AT3G44900 37.531 4.46e-160 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1310 - - gmx:100797995 1533.85