Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1287 ATGTTTTTATGCATTTGGAAAGCCTTTGAAGCTCTCCTCCTATCAGTTAATCTGATAATGGATACTAATTCAAGAAACTGGAGATGGGCAAGAAAGGCCCAATTGCTTATTGCTTCTGCTCTTCTCTTACTGCAAGACTCTCTGGTCAACTCTGCTGAAGCAAGCTCTGTGCACATTGTATACATGGGAGATAAGATATATCAAAATCCACAAACTACTAAAATGTATCACCACAAAATGTTATCATCACTCCTAGGAAGCAAAGAAGCTGCAAAGAATTCAATTCTTTACAGCTATAAGCATGGTTTTTCAGGGTTTGCTGCAAGATTGACAAAATATCAAGCAGAAGCAATAGCAAAGTTTCCTGGTGTAGTGTCTGTCATTCCAAATGGCATTCATAAACTTCATACTACCAGAAGCTGGGACTTTATGGGGGTCCATCATTCCACTTCAAAAATTGCTTTCTCTGACAGCAACTTAGGTGAAGGAACCATCATAGGTGTCATAGACACAGGCATTTGGCCAGAGTCACCAAGTTTCAATGATGAAGCAATGGGACAAATCCCATCAAGGTGGAAAGGAATTTGTCAAGGGGGAAAGCACTTCAACTCCACCAATTGCAACAAGAAGATAATAGGTGCTAGATGGTTCATGAAAGGAATAAGTGATCAGACTAAGAAACTCCTCCAAGGAAACAACTCTGATGAATATCTCTCGGCAAGAGATGCCATTGGCCATGGCACTCACACAGCTTCCACAGCAGCAGGTTACTTTGTAGGAAATGCAAATTATAGGGGACTTGCTTCTGGTTTAGCCAGAGGAGGAGCACCCTTGGCACACTTAGCTATCTACAAGGCTTGTTGGGACTTTCCAATTGGAGATTGCACTGATGCTGATATCCTCAAAGCTTTTGACAAGGCTATACATGATGGAGTTGATGTCTTAACTGTTTCTCTTGGCTTTGCCATTCCTCTGTTCTCCTATGTTGATCAACGTGATTCATTAGCAATTGGTTCTTTTCATGCAACTTCTAAGGGGATCACAGTCGTTTGCTCTGCCGGAAATTCTGGTCCTGTCTCTCAAACCGTTACAAATACTGCACCATGGATCATCACAGTTGGAGCTACCACCATAGATAGGGCCTTTCCAGCAGCCATCACCCTTGGAAATAACCGCACTGTGTGGGGACAGTCCATTGATATGGGAAAACATAATCTTGGATCTGTTGGGCTCACATATTCTGAACGCATAGCTGTAGACCCATCAGATAATTTGGCCAAGGATTGTCAATCTGGAAGTCTAAATGCAACAATGGCAGCAGGCAAAATTGTTCTATGCTTTTCAGTATCAGATCAACAGGACATTGTTTCTGCATCACTTACAGTGAAGGAAGCTGGAGGAGTTGGACTAGTATATGCACAATATCATGAAGATGGACTCAATCAATGTGGTTCATTTCCATGTATCAAGGTAGATTATGAAGTGGGGACACAAACACTAACCTATATTAGAAGATCAAGGTTTCCGACAGCAAGCCTAAGTTTTCCAAAGACTGTTATTGGAAAATGGACATCACCACGAGTTGCATCTTTCTCATCTAGAGGACCCAGTAGCATGTCTCCAACAGTGCTAAAGCCTGACATAGCTGCACCAGGTGTGGACATTTTGGCTGCATTTCCACCAAAGGGCACTACAAGGAGTAGTGGATTTGCATTCCTATCTGGAACTTCAATGTCATGTCCCCATGTGGCAGGAATAGCAGCTCTCATCAAATCCAAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTTACAACAGCATCTCAAACTGGAACTGATGGAAGCCTTATATCTGAAGAGGGTTCCACACATAAGGCAGCAGACCCGTTTGATATTGGGGGTGGACACGTGGACCCCAACAAAGCAATGGATCCAGGACTAATATATGATATCACCACTGAGGATTATGTTCAATTCCTATGTTCCATGGGTCACAGTAGTGCATCCATTAGCAAAGTGACCAAGACCACCACAAGTTGTAAGAAAGGAAAACACCAAACACTGAACCTCAACCTTCCTTCCATATTAGTTCCAAACCTGAAGAGGGTTGCAACAGTAATGAGAACAGTGACAAACGTGGGAAATATTACTGCAGTCTACAAAGCTCTAGTGAAGGTTCCATATGGCATAAAAGTTAGAGTTGAACCTCAAACTTTGAGTTTCAATTCAGATGCACGAATCCTTAACTTTAGTGTCAGTTTCCTGTCAACTCAAAAGTTTCATGGAGATTACAAATTTGGGAGCCTAACATGGACAGATGGCAAGTATTTTGTGAGGACCCCAATTGCTGTGAGGACCATACAGTTTGAATGA 2382 0.424 MFLCIWKAFEALLLSVNLIMDTNSRNWRWARKAQLLIASALLLLQDSLVNSAEASSVHIVYMGDKIYQNPQTTKMYHHKMLSSLLGSKEAAKNSILYSYKHGFSGFAARLTKYQAEAIAKFPGVVSVIPNGIHKLHTTRSWDFMGVHHSTSKIAFSDSNLGEGTIIGVIDTGIWPESPSFNDEAMGQIPSRWKGICQGGKHFNSTNCNKKIIGARWFMKGISDQTKKLLQGNNSDEYLSARDAIGHGTHTASTAAGYFVGNANYRGLASGLARGGAPLAHLAIYKACWDFPIGDCTDADILKAFDKAIHDGVDVLTVSLGFAIPLFSYVDQRDSLAIGSFHATSKGITVVCSAGNSGPVSQTVTNTAPWIITVGATTIDRAFPAAITLGNNRTVWGQSIDMGKHNLGSVGLTYSERIAVDPSDNLAKDCQSGSLNATMAAGKIVLCFSVSDQQDIVSASLTVKEAGGVGLVYAQYHEDGLNQCGSFPCIKVDYEVGTQTLTYIRRSRFPTASLSFPKTVIGKWTSPRVASFSSRGPSSMSPTVLKPDIAAPGVDILAAFPPKGTTRSSGFAFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTASQTGTDGSLISEEGSTHKAADPFDIGGGHVDPNKAMDPGLIYDITTEDYVQFLCSMGHSSASISKVTKTTTSCKKGKHQTLNLNLPSILVPNLKRVATVMRTVTNVGNITAVYKALVKVPYGIKVRVEPQTLSFNSDARILNFSVSFLSTQKFHGDYKFGSLTWTDGKYFVRTPIAVRTIQFE* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1287 793 Pfam Peptidase inhibitor I9 57 136 IPR010259 -
Gso5g1287 793 ProSitePatterns Serine proteases, subtilase family, serine active site. 575 585 IPR023828 -
Gso5g1287 793 Gene3D - 379 520 - -
Gso5g1287 793 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 47 791 - -
Gso5g1287 793 CDD PA_subtilisin_like 386 513 - -
Gso5g1287 793 Pfam Subtilase family 161 613 IPR000209 GO:0006508|GO:0008236
Gso5g1287 793 PANTHER PEPTIDASE S8 47 791 - -
Gso5g1287 793 PRINTS Subtilisin serine protease family (S8) signature 161 180 IPR015500 -
Gso5g1287 793 PRINTS Subtilisin serine protease family (S8) signature 242 255 IPR015500 -
Gso5g1287 793 PRINTS Subtilisin serine protease family (S8) signature 574 590 IPR015500 -
Gso5g1287 793 ProSiteProfiles Serine proteases, subtilase domain profile. 140 646 - -
Gso5g1287 793 Gene3D Peptidase S8/S53 domain 163 659 IPR036852 GO:0004252|GO:0006508
Gso5g1287 793 Gene3D - 663 790 - -
Gso5g1287 793 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 45 136 IPR037045 -
Gso5g1287 793 SUPERFAMILY Subtilisin-like 135 650 IPR036852 GO:0004252|GO:0006508
Gso5g1287 793 CDD Peptidases_S8_3 133 611 IPR034197 -
Gso5g1287 793 Pfam Fibronectin type-III domain 692 787 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1287 Gso-Chr5 36386201 36390185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1287 51 789 Subtilisin-like Serine Gene Family AT1G32960 51.340 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1287 - - gmx:100792709 1550.8