Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1271 ATGTTGAAATCTTTGCGGAAAAGCCTAAGCCTTCAACAGAAGTGTCTCCAGCACAAGAACCAAGTTGATAACGCTGAGTCAGTGCATGGTGCAAACCTGGCAAATTGCATTTTTTGCGTGGAGGAAACTAAACAATGCAAGTGTGACCACAACAACATTGAGGATACAAAGAGTGCAGAAGGGGGCACCAATTTAGATGCAGAGCATGACTCCGAAGCCAATTGTTCTTTCACTTATGCTGTCATCAATATGGTCGGGATGCTCATAGGTCTGGGGCAATTATCAACTCCATATGCTCTAGAGCAAGGAGGGTGGGCATCTGCATTTTTGCTTATAGGACTCGGTGTGATATGTGCATATAGTTCTCATTTACTTGGGAAATGCCTAGAAAAGAACACCAAGTTAAGAAGTTACGTGGACATTGGGAGTCATGCATTTGGTGCAAAAGGAAGAATCATGGCTACAACTTTCATCTACATGGAGATCTTCATGGCCCTTGTTTCCTACACCATCTCATTGCATGACAACTTGAATTCAATCTTCTCAGGGATGCATCTGAAGCTCCAATTGGCAAAACTATCTACATTACAGCTCCTGACCATTGGTGCAGTGTTGATTGCTCTGCCTAGTTTGTGGCTCAGAGATCTCTCTTCCAGATCTTTCCTTTTAACTGGTGGCATTCTCATGTTCCTTGTCATTTTTGTGTCAATAGCATCCACTCCAATTTTTGGAGGTGTTCAAATTAATCATAAGATACCCCTCCTCCACCTCCACAACATTCCTTCAATTTCTGGCCTTTACATCTTCAGCTATGGAGGACACATTGTTTTCCCTAATTTGTATAAAGCCATGAAAGACCCCTCAAAGTTTACCAAGGTATCTATAGTGAGCTTCACATTAGTTACATTACTTTACACGACCTTGGGTTTCATGGGTGGCAAAATGTTTGGGCCGGATGTCAATTCTCAGGTAACCCTCAGCATGCCACCAAAGCTTTTTGTAACAAAGATTGCTCTGTGGGCAACCGTGGTGACGCCTATGACCAAATATGCCCTTGAATTTGCACCTTTCGCTATTCAGTTAGAGAAAAGGCTTCCCAAGTTTAACAGTGGCAGGACAAAAATGATAATTAGGGGTAGTGTGGGTTCATTTTTGCTTTTGGTTATACTAGCCCATGCTCTTTCAGTGCCATATTTTGAACATGTACTCTGCCTCACTGGTTCTCTAGTTAGTGTTGCAATTTGTTTGATTTTCCCATGTGCTTTCTACATAAAAATTTGTTGGGGTCAAATATCAAAGCCTCTCTTTGTCCTAAACCTCTCTATCATCACATGTGGGTTTCTTCTTGGGGTCATGGGCACCATTTCCTCCTCAAAATTGCTAGTGAAACATTTTCTACAAGCTCAATCTGCTTGA 1416 0.4202 MLKSLRKSLSLQQKCLQHKNQVDNAESVHGANLANCIFCVEETKQCKCDHNNIEDTKSAEGGTNLDAEHDSEANCSFTYAVINMVGMLIGLGQLSTPYALEQGGWASAFLLIGLGVICAYSSHLLGKCLEKNTKLRSYVDIGSHAFGAKGRIMATTFIYMEIFMALVSYTISLHDNLNSIFSGMHLKLQLAKLSTLQLLTIGAVLIALPSLWLRDLSSRSFLLTGGILMFLVIFVSIASTPIFGGVQINHKIPLLHLHNIPSISGLYIFSYGGHIVFPNLYKAMKDPSKFTKVSIVSFTLVTLLYTTLGFMGGKMFGPDVNSQVTLSMPPKLFVTKIALWATVVTPMTKYALEFAPFAIQLEKRLPKFNSGRTKMIIRGSVGSFLLLVILAHALSVPYFEHVLCLTGSLVSVAICLIFPCAFYIKICWGQISKPLFVLNLSIITCGFLLGVMGTISSSKLLVKHFLQAQSA* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1271 471 Pfam Transmembrane amino acid transporter protein 75 455 IPR013057 -
Gso5g1271 471 PANTHER OS05G0424000 PROTEIN-RELATED 21 467 - -
Gso5g1271 471 PANTHER AMINO ACID TRANSPORTER AVT1H 21 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1271 Gso-Chr5 36259255 36261817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1271 36 469 Amino Acid or Auxin Permease AAAP Family AT5G16740 59.268 2.97e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1271 - - gmx:100787423 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1271 5 36259255 36261817 Gso5g1271 5 36259255 36261817 ECH