Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1270 ATGGAGATCGTTCGTCCTCAGAATCGCAGAAACTTGTTGTCCTCCTCCAACGAAGCCGTTTCTGCTCCCACCATTCCCCTCTATCGCTCTGCTCCCCCACTTGAAGTCAGGCTCGAGGATTTCGAGTCCTTCGCCATCGATCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGTATGTCACGGGGGAAAAAAGCGGAAGAAATGGAGAATTTGGTAAAGGACCTGTGGAAAGTGAATATGAGACATCAAGAGGCAACTCAGGTTCTGAACAAGGATATTATATCTCATTTTGTTCTACGTCTGGTGTATTGCAGAACGGAGGACTTGAGGAAATGGTTTCTTTCCATGGAATCTGCACTCTTTCGCTACCGTTTTCGTCTTCTGAATGCTGAAGCTCAGAGGACAGTCATGGAAGAATTTGACCTTCCTTACAGGGCCGTTAGCAATGTGGAATTTGAGAGCATAAAAGAGAAATTGGGACAAGTTGCACGTTCTATGGGTCAGCCTTCACCTACTGCTGATGCTATCTTCTACAAGGTACCGTTTGAAGAAGTTCCAGAGCTTGTTGCTGGACGGAGAGTGTTTATAAATCAAGGATATGCATATGTTGCAATGAATCAGATTGTTTCACTTGTAGCCACACAATTCCGCAGTCAGCTGTCAAAGGCACTTATCCTTACAAACAGAAAATGGACATCTTCAATTAGAGAGCAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCCTGTCCTCAAGTTATCTGGGTCCTGATTATTCTCAGTCAAGAGAATATGCTGATATATCATTAAAGGACATAGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAAAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTGAAGGGTGTTGGCTTAAATCTGGATGATGCACTTGCATTTTGGAGGTCAGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTTGAGAAACAATATGCATACAACATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTCAAAAGATTATTTCATCAACTCCTGGAGCTGGGGATCATCATGGTTGCCCCTATCGACATTTCAGTGAAGAGAACCTAAGAGCTGCTCTTAGCGGAATGGGGGTAAACAGTCAAGCAATGGAAGATGTGATGGACAAAGTGAGAAATAGACATTATCAGTTGGCTTGCACCTTGACATTTGAAGCTCTTCATGGCATGCCGTGTGATGCAGGGATTAACCATCCAAATCAATACTTCAGTGACAGTCAAAAGATATTAAAGCCAAAGAAGGATTCTTCAGCCTAA 1374 0.4323 MEIVRPQNRRNLLSSSNEAVSAPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGMSRGKKAEEMENLVKDLWKVNMRHQEATQVLNKDIISHFVLRLVYCRTEDLRKWFLSMESALFRYRFRLLNAEAQRTVMEEFDLPYRAVSNVEFESIKEKLGQVARSMGQPSPTADAIFYKVPFEEVPELVAGRRVFINQGYAYVAMNQIVSLVATQFRSQLSKALILTNRKWTSSIREQEKHRLTPIVEALSSSYLGPDYSQSREYADISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRSEFSKKVGLEKFEKQYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDHHGCPYRHFSEENLRAALSGMGVNSQAMEDVMDKVRNRHYQLACTLTFEALHGMPCDAGINHPNQYFSDSQKILKPKKDSSA* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1270 457 PANTHER DNA PRIMASE LARGE SUBUNIT 1 453 - -
Gso5g1270 457 PIRSF DNA_primase_large 2 457 IPR016558 -
Gso5g1270 457 Gene3D - 3 250 - -
Gso5g1270 457 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 442 IPR007238 GO:0006269
Gso5g1270 457 PANTHER DNA PRIMASE LARGE SUBUNIT 1 453 IPR007238 GO:0006269
Gso5g1270 457 CDD PriL_PriS_Eukaryotic 27 445 IPR016558 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1270 Gso-Chr5 36246010 36254138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1270 1 452 Core DNA Replication Machinery Family AT1G67320 67.623 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1270 K02685 - gmx:100806321 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1270 5 36246010 36254138 Gso8g0881 8 8198846 8205765 GST