Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1250 ATGAAACCCACGGCAACATTCTTCTTTCTCCTTCCTTCAACAACACTCGTTGTTTGTCTTTGCCTTGGAATTGGAACAACCACCCTCTTTATAACCCTCCTCGCAATTTCCCTTAACTACTGGCTTGTCCCTGGAGGCTTTGCATGGAGAAACTATGACTATTATCAAACCAAAAAAAAACTTACTGGGCCTATGGGCTGGCCCATACTCGGGACTCTGCCTCTCATGGGCTCTTTAGCTCACCAAAAACTTGCGGCTTTAGCCACTTCGCTGAACGCAAAGAGGTTAATGGCGCTGAGTCTGGGCCCCACTCCCGTTGTTATAAGCAGCCACCCCGAGACCGCTAGAGAAATCTTGTTGGGTTCATCGTTTTCGGATCGTCCGATAAAAGAATCGGCACGCGCTCTCATGTTCGAGCGTGCCATTGGTTTCGCTCATTCAGGAACCTACTGGCGGCACCTACGTAGGATCGCGGCGTTTCATATGTTCTCTCCGAGGAGGATTCATGGCTTGGAGGGTCTCCGACAACGCGTGGGTGACGACATGGTGAAGAGCGCGTGGAGGGAGATGGGGGAGAAGGGGGTGGTGGAGGTTCGGAGGGTATTTCAGGAAGGGTCACTTTGTAATATTTTGGAGAGTGTTTTTGGAAGTAACGATAAGAGTGAGGAGTTGAGGGATATGGTTAGGGAAGGGTACGAGTTGATTGCGATGTTTAACTTGGAGGATTATTTTCCCTTCAAGTTTTTGGATTTTCATGGGGTGAAGAGAAGGTGCCACAAGTTGGCGGCTAAGGTTGGTAGTGTGGTGGGCCAAATTGTGGAGGAACGAAAAAGAGATGGTGGTTTTGTTGGGAAGAATGATTTTCTTAGCACTTTGCTATCCTTGCCCAAAGAAGAAAGATTGGCTGATTCAGATCTGGTGGCTATTCTGTGGGAAATGGTATTTCGAGGAACAGACACAGTTGCAATACTCCTTGAATGGGTTATGGCAAGGATGGTTTTACACCAAGACTTACAAAAGAAAGCCCGCGAAGAAATCGACACGTGCGTCGGCCAAAACAGTCACGTGCGAGACTCGGATATTGCGAATCTCCCTTACCTCCAGGCCATAGTGAAAGAAGTTCTCCGGCTGCACCCACCAGGCCCGCTACTATCATGGGCTCGCCTTGCGGTCCATGATGTCCATGTGGACAAAGTCCTCGTGCCAGCTGGCACAACAGCAATGGTTAACATGTGGGCCATTTCGCATGACTCGTCCATCTGGGAAGACCCATGGGCTTTCAAGCCCGAGAGGTTCCTCAAAGAAGATGTTTCCATCATGGGATCGGACTTGAGGCTTGCACCCTTCGGGGCTGGACGTAGGGTGTGTCCGGGCCGGGCCTTGGGCTTGGCCACGGCCCATCTCTGGCTCGCGCAACTTCTTCGCCACTTCATATGGCTTCCCGCACAGACCGTGGATCTTTCCGAATGCCTTAGGCTTTCCATGGAAATGAAGACACCTCTGCGATGCCTAGTGGTTCGTAGATAA 1527 0.5062 MKPTATFFFLLPSTTLVVCLCLGIGTTTLFITLLAISLNYWLVPGGFAWRNYDYYQTKKKLTGPMGWPILGTLPLMGSLAHQKLAALATSLNAKRLMALSLGPTPVVISSHPETAREILLGSSFSDRPIKESARALMFERAIGFAHSGTYWRHLRRIAAFHMFSPRRIHGLEGLRQRVGDDMVKSAWREMGEKGVVEVRRVFQEGSLCNILESVFGSNDKSEELRDMVREGYELIAMFNLEDYFPFKFLDFHGVKRRCHKLAAKVGSVVGQIVEERKRDGGFVGKNDFLSTLLSLPKEERLADSDLVAILWEMVFRGTDTVAILLEWVMARMVLHQDLQKKAREEIDTCVGQNSHVRDSDIANLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATAHLWLAQLLRHFIWLPAQTVDLSECLRLSMEMKTPLRCLVVRR* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1250 508 Coils Coil 506 508 - -
Gso5g1250 508 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Gso5g1250 508 Gene3D Cytochrome P450 50 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 SUPERFAMILY Cytochrome P450 63 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 Pfam Cytochrome P450 63 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g1250 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 27 508 - -
Gso5g1250 508 PANTHER CYTOCHROME P450 78A7-RELATED 27 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1250 Gso-Chr5 36045880 36048501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1250 31 508 Cytochrome P450 AT1G13710 53.644 3.47e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1250 - - gmx:100784757 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1250 5 36045880 36048501 Gso8g0866 8 8040283 8042670 GST
Gso13g1561 13 30953091 30955339 Gso5g1250 5 36045880 36048501 PCT
Gso5g1250 5 36045880 36048501 Gso13g1561 13 30953091 30955339 PCT