Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1249 ATGTCGGGTGATTTAGCATACAAGAGCATTCTCCAGAGTTCAGCACTTATGAAGTACATCTTTGAAACGAGTGCCTATCCAAAAGAGCATGAACAATTAAAGCTACTCAGAGAGACCACGGTACAGAAGTGCCAGGAAAATTCGGAATATATCATGAATGTGCCAGTGGATGAAGCGCAGTTCGTATCTATTCTGCTTAAAATCATGAATGCGAAGAAAACACTGGAAATTGGAGTATTCACTGGCTATTCTCTTCTTGCCACAGCTCTTGCTCTGCCTCATGATGGCAAGATAACAGCAATTGATGTAAATAGAAAAACATACGAGATTGGATTGCCATTCATTCAAAAGGCAGGAATGGAGCACAAAATTGACTTTATCCTTGGTGATGCATTATCAGTTCTCAACGATCTTATTAATGATAAGCATGAAGACTCATTTGACTATGTATTTGTGGATGCGGATAAAGCAGAATACATAAAATATCACGAGTTGGTGTTAAAATTGGTGAAAAAGGGTGGAATAATTGCATATGACAACACTTTATATTTTGGTACAGTTGCTATGCCTGAGGAAGACGTAAAGTGGGATATTCTGAGGCAGAATAGAAAGCCTTTGATTGAATTCAACAACTTTATAGCAAACGATTCTCGCTTGGAATCAGCAATTGTTTCTATTGGGGATGGCGTAACCCTGTGTAGACGTCTGTGA 711 0.3882 MSGDLAYKSILQSSALMKYIFETSAYPKEHEQLKLLRETTVQKCQENSEYIMNVPVDEAQFVSILLKIMNAKKTLEIGVFTGYSLLATALALPHDGKITAIDVNRKTYEIGLPFIQKAGMEHKIDFILGDALSVLNDLINDKHEDSFDYVFVDADKAEYIKYHELVLKLVKKGGIIAYDNTLYFGTVAMPEEDVKWDILRQNRKPLIEFNNFIANDSRLESAIVSIGDGVTLCRRL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1249 236 PANTHER O-METHYLTRANSFERASE-RELATED 5 236 - -
Gso5g1249 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 235 IPR029063 -
Gso5g1249 236 Pfam O-methyltransferase 22 236 IPR002935 GO:0008171
Gso5g1249 236 Gene3D Vaccinia Virus protein VP39 2 236 IPR029063 -
Gso5g1249 236 CDD AdoMet_MTases 75 178 - -
Gso5g1249 236 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 236 IPR002935 GO:0008171
Gso5g1249 236 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 5 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1249 Gso-Chr5 36021098 36024256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1249 1 236 Monolignol Biosynthesis Gene Families AT1G67990 55.932 3.51e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1249 K00588 K13272 gmx:100500657 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1249 5 36021098 36024256 Gso8g0865 8 8017708 8021452 GST