Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso5g1242 | ATGATGGATGTTGCTGAGGTTGAGGAAAATCTGTTTGCTGCAAGTGATGCCAAGTTACATGGACAGATGTGCAAGACTCTTTCTATAATATATTGCAAAGTATTGTCTGTATTTCCTTCTTTAGAAGCTGCTAGGCCTAGGAGTAAAACTGGTATTCAGGCATTATGTTCATTGCATGTAGCCTTGGAGAAAGTAAAGAATGTTCTTCAGCACTGCTCGGAGTGTAGTAAACTTTACTTGGCTATAACTGGAGATTCTGTCCTCCTAAAATTTGAGAAGGCTAAATGTGCTCTTGAAGATAGTCTTAGACGGGTGGAAGATATTGTTCCACAATCTATTGGGTGTCAGGTTCAGGAGATTGTGAATGAATTTGCAACAATAGAATTTGCACTTGACCCATCAGAGAAGCAAGTTGGTGATGATTTAATTGCATTGCTCCAACAGGGAAGAAAGTTTAATGACTCTAATGACAGCAATGAGCTTGAATCTTTTCACCAGGCTGCTACTAGACTTGGAATTACATCTTCAAGAGCAGCTCTTGCTGAAAGAAGAGCTCTCAAGAAACTCATAGAAAGGGCTCAATCTGAGGAAGACAAGCGGAAGGAATTAATTATTGCATATCTTTTACATCTTATGAGGAAATACTCCAAGTTATTTAGAAACGAGTTCTCAGATGACAATGATTCTCAGGGTTCTGCACCTTGTTCTCCCGTTCAAGGATCTATCGAGGATAGTGTTCCTGGTAGTCATTGTCAAGCCTTTGACAGACAACTTTCAAAATTCAGTTGCTTTAATTTCAAACCAAATATTAGTAGGACATCTGGGCAGATGCCTCTTCCACCTGAAGAGTTAAGGTGTCCAATATCTCTGCAACTCATGTATGATCCTGTTATCATTGCTTCTGGGCAGACTTATGAAAGGGTTTGTATAGAGAAATGGTTCAGTGATGGGCACAACAACTGCCCAAAGACCCAGCAGAAACTTTCACATCTTTGTTTGACTCCTAATTATTGTGTTAAGGGCCTTGTTTCTAGTTGGTGTGAACAAAATGGAGTTCCTATTCCTGAAGGCCCTCCTGAATCTCTTGATCTTAACTACTGGGGATTGGTATTATCAGAGTCTGAATCTACAAATTCAAAATCTGTAAATAGTGTCAGCTCTTGCAAGTTGAAGGGTGTCCATGTGGTTCCTTTGGAAGAGAGTGGTATCTCAGAGGAATCTGTGGAAAATGGAACTGAAAGTGTTTCTGCACAAGAGGAAGACACTGAGCAGTATTTTAGCTTTCTGAAAGTCTTGACTGAGGTGAACAATTGGAGGAAGCAATGTGAAGTAGTAGAACAGTTAAGGCTGCTGCTGAGGGATGACGAGGAAGCCAGGATTTTTATGGGGGCAAATGGGTTTGTTGAAGCACTTTTGCAGTTTTTGCAATCAGCTGTGCGTGAAGGTAGTTTGATGGCTCTGGAAAGTGGAGCAATGGCTCTCTTCAACCTGGCTGTGAATAATAACAGAAATAAGGAAATTATGTTATCGGCTGGAGTATTATCATTGTTGGAGGAAATGATTCCTAAAACTAGTTCTTATGGTTGTACAACTGCTCTTTATTTGAGTCTCTCTTGCCTTGAAGAAGCCAAGCCTATGATTGGCATGAGTCAGGCTGTCCAGTTCCTAATCCAGCTTCTTCAATCGGACTCTGATGTTCAATGCAAGCAAGATTCTCTCCATGCTCTCTATAATCTTTCTACTGTGCCCTCAAATATTCCATACCTCCTTTCATCTGGCGTCATTAGTGGCTTACAATCCCTTCTTGTAGGCGAGGGGGATTGCATTTGGACAGAAAAATGCGTAGCTGTTTTGATAAATTTAGCTACTTCTCAAGTTGGAAGGGAGGAAATTGTATCTACTCCTGGACTCATTGGTGCATTGGCTTCGATATTGGACACCGGTGAGCTCATAGAACAGGAGCAAGCTGTCTCTTGTCTCCTAATTTTGTGCAATAGAAGTGAGGAATGCAGTGAGATGGTCCTGCAGGAAGGGGTTATACCAGCATTGGTTTCAATATCAGTGAATGGAACTCCAAGAGGTCAAGAAAAAGCTCAGAAACTCTTGATGTTGTTCCGAGAGCAGCGACGAGACCCTTCACCAGTTAAGACACATCAGTGCTCACCTGAAGCTAGTGATTTGTCTATGCCGCCTGCTGAAATGAAACCGCTATGCAAGTCCATTTCAAGAAGAAAGTCTGGGAGAGCTTTTAGCTTTTTCTGGAAAAACAAGAGCTATTCTGTATACCAGTGTTAA | 2295 | 0.4139 | MMDVAEVEENLFAASDAKLHGQMCKTLSIIYCKVLSVFPSLEAARPRSKTGIQALCSLHVALEKVKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEFATIEFALDPSEKQVGDDLIALLQQGRKFNDSNDSNELESFHQAATRLGITSSRAALAERRALKKLIERAQSEEDKRKELIIAYLLHLMRKYSKLFRNEFSDDNDSQGSAPCSPVQGSIEDSVPGSHCQAFDRQLSKFSCFNFKPNISRTSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQKLSHLCLTPNYCVKGLVSSWCEQNGVPIPEGPPESLDLNYWGLVLSESESTNSKSVNSVSSCKLKGVHVVPLEESGISEESVENGTESVSAQEEDTEQYFSFLKVLTEVNNWRKQCEVVEQLRLLLRDDEEARIFMGANGFVEALLQFLQSAVREGSLMALESGAMALFNLAVNNNRNKEIMLSAGVLSLLEEMIPKTSSYGCTTALYLSLSCLEEAKPMIGMSQAVQFLIQLLQSDSDVQCKQDSLHALYNLSTVPSNIPYLLSSGVISGLQSLLVGEGDCIWTEKCVAVLINLATSQVGREEIVSTPGLIGALASILDTGELIEQEQAVSCLLILCNRSEECSEMVLQEGVIPALVSISVNGTPRGQEKAQKLLMLFREQRRDPSPVKTHQCSPEASDLSMPPAEMKPLCKSISRRKSGRAFSFFWKNKSYSVYQC* | 765 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso5g1242 | 764 | SMART | Ubox_2 | 283 | 346 | IPR003613 | GO:0004842|GO:0016567 | |
| Gso5g1242 | 764 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 280 | 353 | IPR013083 | - | |
| Gso5g1242 | 764 | Gene3D | - | 400 | 713 | IPR011989 | - | |
| Gso5g1242 | 764 | SMART | arm_5 | 455 | 499 | IPR000225 | GO:0005515 | |
| Gso5g1242 | 764 | SMART | arm_5 | 540 | 581 | IPR000225 | GO:0005515 | |
| Gso5g1242 | 764 | Pfam | U-box domain | 281 | 350 | IPR003613 | GO:0004842|GO:0016567 | |
| Gso5g1242 | 764 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 2 | 756 | - | - | |
| Gso5g1242 | 764 | SUPERFAMILY | ARM repeat | 429 | 706 | IPR016024 | - | |
| Gso5g1242 | 764 | MobiDBLite | consensus disorder prediction | 710 | 729 | - | - | |
| Gso5g1242 | 764 | ProSiteProfiles | U-box domain profile. | 279 | 353 | IPR003613 | GO:0004842|GO:0016567 |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso5g1242 | 5 | 35929633 | 35934594 | Gso8g0858 | 8 | 7954481 | 7959513 | GST | |
| Gso18g0071 | 18 | 609706 | 615010 | Gso5g1242 | 5 | 35929633 | 35934594 | PCT | |
| Gso13g1550 | 13 | 30881961 | 30887325 | Gso5g1242 | 5 | 35929633 | 35934594 | PCT | |
| Gso5g1242 | 5 | 35929633 | 35934594 | Gso18g0071 | 18 | 609706 | 615010 | PCT | |
| Gso5g1242 | 5 | 35929633 | 35934594 | Gso13g1550 | 13 | 30881961 | 30887325 | PCT |
Showing 1 to 5 of 5 entries