Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1224 ATGGATTTATCTTCTCTTTTTCTTGTTTTAATCCCTCTGTTGACATCATTTGCTGTTTGCCAACTTGAAGAATTTGTTAGCATTGATTGTGGAGGGACAAGTAATTACACTGATACCAGCACGGGGTTGGCATGGATCTCAGATTCTAGGATCATGCAACATGGCATTTCAGTGGAAGTAGAAAGTCCAAATAGAAGCATGGTGCAGTATCAAAAGCGAAGAGACTTTCCCATAGAGAGCAAGAAGTACTGTTACACACTAAGCACAGAAGAGAGAAGAAGATATTTGGTGAGAGCAACGTTTCAGTATGGAAGCTTGGACAGTGGAGACACTTACCCTCAGTTTCAGCTCTACTTGGATGCAACAAAATGGGCCACAGTGTCAATATATGATGCCTCAAGGATATATGTTAAGGAAATGATCATCAGAGCACCCTCAAATTCTATTGATGTTTGCATGTGCTGTGCTACAACTGGTTCTCCTTTTATATCTACCCTTGAGTTGCGGCCCTTGAATCTTTCCATGTATGCCACGGATTTTGAGGACAATTTCTTCTTGGAAGTTGCTGCAAGAATAAACTTTGGTGCTCCAACTGAGGATGCTGTCAGGTACCCGGATGACCCGTATGATAGAATTTGGGATTCTGATCTTATTAAAAGGCAAAATTATCTTGTTGGAGTGGCACCAGGCACAGAAAGAATTAGCACAACAAGGAACATAGATATAGAGACAAGAGAATACCCGCCTGTTAAAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGAGTACTCAGCTACAGATTGAACCTGGAAGACTTCCCTGCCAATGCTCGAGCTTATGCATATTTCGCAGAGATTGAAGATTTGGGTCAGAACGAGAGTCGAAAATTCAAATTAAAGCAACCTTATATAGCTGACTATAGCAATGCAGTAGTTAACATTGCCGAGAATGCCAATGGGAGCTACACTTTATATGAACCAAGTTACATGAATGTGACTCTGGAGTTTGTTTTATCATTCTCCTTTGTTATGACCCCGGATTCTACTCGAGGACCTCTTCTAAATGCACTGGAAATAAGTAAATATGTACAGATTGCTTCAAAAACAGACAAGCAAGACACAACTGTTGTAAATGCTTTTCGATTATTGTCTGCTCAAAGTTCCCAGACAAACGAAGGCGATCCTTGTGTTCCAACTCCCTGGGAATGGGTGAATTGTAGTACCACCACACCTCCAAGAATTACTAAAATAATTCTTTCGAGAAGGAATGTGAAGGGTGAAATCCCATCTGAGCTTAGCAATATGGAAGCATTGACAGAGTTGTGGTTAGATGGCAACTTGCTTACTGGACAGTTACCTGACATGAGCAAACTTATAAATCTAAAGATTGTGCATTTAGAGAACAACAAGTTGACAGGTCGACTACCATCTGACATGGGTAGTTTGCCAAGCTTACAGGCATTGTTCATACAGAACAACTCATTTAGCGGGGAAATACCAGCCGGATTAATATCTAAAAAAATCATTTTTAACTATGATGGTAATGCTGAACTACACAGAGGAAAGAAGAAGCATTTTAAGATGGTTTTGGGAATTTCAATTGGAGTACTAGTGATTCTATTAATATTATTCTTAGTAAGTTTGGTACTATTGCTTAATACACGGAGAAAGGCGTCTAAAAAGAAACGTGAGGAAAAAGGAATTTCTGGACGCACTAACAGTAAACCTGGATACTCGTTTCTTCGGGGTGGAAATTTAATGGATGAAAATACTACTTGCTATATTACACTCTCGGAGTTGAAAGAAGCTACTGACAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTATTATGGGAAAATGAGAGATGGAAAAGAAATAGCAGTTAAAAGTATGAATGAATCATCTTGTCACGGGAACCAGCAATTTGTTAACGAGGTGGCCCTCCTATCCAGAATTCATCACAGAAATTTGGTTCCCTTGATTGGATATTGTGAAGAAGAATGTCAGCATATTCTGGTTTACGAGTATATGCACAATGGCACTTTACGGGATCACATTCATGAGAGTTTCAAGAAGCAGAAGTTAGACTGGTTAGCTCGTCTTCGTATTGCAGAAGATGCAGCCAAAGGTCTTGAATACCTACACACAGGATGCAATCCTAGTATCATTCACCGTGACATAAAGACAGGAAATATTCTCCTAGACATCAATATGAGAGCAAAAGTATCAGACTTTGGACTCTCCAGATTAGCTGAAGAAGATTTAACCCATATATCTAGCATTGCACGAGGAACTGTAGGCTACTTGGATCCTGAGTACTATGCAAGTCAGCAATTGACAGAAAAGAGTGATGTATACAGTTTTGGAGTTGTTCTGCTAGAACTGATTGCTGGAAAAAAGCCTGTGTCATCTGAAGATTACAGTGACGAAATGAACATTGTTCACTGGGCAAGATCCTTAACTCATAAAGGAGATGCAATGAGCATCATTGACCCTTCTCTAGAAGGAAATGCCAAAACTGAGTCCATTTGGAGGGTGGTTGAAATTGCCATGCAATGTGTTGAACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATCAAGATTGAAAAAGGAACAGAGAATAAGCTAAAGTCTTCATCATCATTTTCAGGTAGTAGTAGTTCAAAGCCACATTCTTCCCGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACGTATCAAATGGTTGCCTTCCATCAGCAAGATAA 2796 0.3974 MDLSSLFLVLIPLLTSFAVCQLEEFVSIDCGGTSNYTDTSTGLAWISDSRIMQHGISVEVESPNRSMVQYQKRRDFPIESKKYCYTLSTEERRRYLVRATFQYGSLDSGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIKRQNYLVGVAPGTERISTTRNIDIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGQNESRKFKLKQPYIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVMTPDSTRGPLLNALEISKYVQIASKTDKQDTTVVNAFRLLSAQSSQTNEGDPCVPTPWEWVNCSTTTPPRITKIILSRRNVKGEIPSELSNMEALTELWLDGNLLTGQLPDMSKLINLKIVHLENNKLTGRLPSDMGSLPSLQALFIQNNSFSGEIPAGLISKKIIFNYDGNAELHRGKKKHFKMVLGISIGVLVILLILFLVSLVLLLNTRRKASKKKREEKGISGRTNSKPGYSFLRGGNLMDENTTCYITLSELKEATDNFSKKIGKGSFGSVYYGKMRDGKEIAVKSMNESSCHGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHESFKKQKLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDIKTGNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELIAGKKPVSSEDYSDEMNIVHWARSLTHKGDAMSIIDPSLEGNAKTESIWRVVEIAMQCVEQHGASRPRMQEIILAIQDAIKIEKGTENKLKSSSSFSGSSSSKPHSSRKTLLTSFLEIESPDVSNGCLPSAR* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1224 931 Pfam Protein tyrosine and serine/threonine kinase 607 872 IPR001245 GO:0004672|GO:0006468
Gso5g1224 931 MobiDBLite consensus disorder prediction 561 580 - -
Gso5g1224 931 SMART serkin_6 605 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1224 931 SUPERFAMILY Protein kinase-like (PK-like) 591 872 IPR011009 -
Gso5g1224 931 ProSiteProfiles Protein kinase domain profile. 605 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1224 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Gso5g1224 931 CDD STKc_IRAK 611 872 - -
Gso5g1224 931 Pfam Malectin-like domain 28 361 IPR024788 -
Gso5g1224 931 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Gso5g1224 931 SUPERFAMILY L domain-like 397 504 - -
Gso5g1224 931 Gene3D Ribonuclease Inhibitor 368 515 IPR032675 -
Gso5g1224 931 PANTHER OS07G0107800 PROTEIN-RELATED 12 899 - -
Gso5g1224 931 Gene3D Phosphorylase Kinase; domain 1 585 680 - -
Gso5g1224 931 Gene3D Transferase(Phosphotransferase) domain 1 681 898 - -
Gso5g1224 931 PANTHER - 12 899 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1224 Gso-Chr5 35744542 35750288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1224 13 931 Receptor kinase-like Gene Family AT1G67720 67.965 0.0 1276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso5g1224 Malectin_like 1.4e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1224 - - gmx:100790944 1789.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1224 5 35744542 35750288 Gso8g0839 8 7785228 7791051 GST