Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1218 ATGCCTAAGCAGATCCACGAGATTAAGGATTTCCTTCTGACGGCACGGAGGAAGGATGCGAGGTCGGTGAAAATCAAGAGGAGCAGGGATGTCGTTAAGTTTAAGGTTCGATGCTCCAAGTATTTGTACACGCTTTGTGTCTTTGATCCTGAGAAAGCCGATAAATTGAAGCAATCTCTTCCTCCCGGTTTGAGTGTTCAAGACCTGTAG 210 0.4619 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1218 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 - -
Gso5g1218 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Gso5g1218 69 Gene3D - 1 69 IPR038464 -
Gso5g1218 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1218 Gso-Chr5 35672754 35673511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1218 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 1.07e-43 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1218 K02923 - gmx:100795924 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1218 5 35672754 35673511 Gso8g0831 8 7721369 7722087 GST