Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1180 ATGACTTCATACGGTACCACAATTTTGGCACACTTGTTTGGCCTTCTTGCTCTCATCCTCTTGCTTGTTTGGTTGCTGAATTATCGCGAGGGCATTGAATATGATTCTGAAAATCCACTTCGTGTTTTCAATGTTCACCCTTTTATGATGTTCTTTGGATTCATTTTCCTTATTGGTCAAGCAATACTGTCATACCAAACGGTGCCAGGGCCACACGAAACAAAGAAGATCATTCACTTGACACTTCATTTCATTGCAATAATTCTTGGGATTGTTGGTTTATGTGCCGTTTTCAAGTTCCATGATATGGTATACTGGGAGGACGTAACCAGCCTCCATTCATGGATTGGCATTGGCACCTTTTGCTTGGTTGGCTTGCAGTGGCTTATGGGACTGGGATTTATGCTTCAAGGATCTTCACAATCAAGGAGTGCAATGGCCCCATGGCACGTAGCAGGTGGTAGAGCACTATTTTTCATGGCAATATGTGCTGCACTAACAGGGTTGATGGAGAAGTATACTATGTTAAAACCCGCCCTACACCAGAGAGAATCTCATTTAATCAACTTCACGGGTCTAGCTATTCTCTTGTTTGGAGTCTTTGTGGATATGGCAGTGGGTTTGGCCCGTTATGCCTGA 639 0.4335 MTSYGTTILAHLFGLLALILLLVWLLNYREGIEYDSENPLRVFNVHPFMMFFGFIFLIGQAILSYQTVPGPHETKKIIHLTLHFIAIILGIVGLCAVFKFHDMVYWEDVTSLHSWIGIGTFCLVGLQWLMGLGFMLQGSSQSRSAMAPWHVAGGRALFFMAICAALTGLMEKYTMLKPALHQRESHLINFTGLAILLFGVFVDMAVGLARYA* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1180 212 ProSiteProfiles Cytochrome b561 domain profile. 9 207 IPR006593 -
Gso5g1180 212 Pfam Eukaryotic cytochrome b561 45 174 IPR006593 -
Gso5g1180 212 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 3 209 - -
Gso5g1180 212 CDD Cyt_b561_ACYB-1_like 36 177 - -
Gso5g1180 212 PANTHER CYTOCHROME B561-RELATED 3 209 IPR043205 GO:0016491
Gso5g1180 212 Gene3D - 1 209 - -
Gso5g1180 212 SMART 561_7 45 169 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1180 Gso-Chr5 35065653 35067758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1180 6 211 Chloroplast and Mitochondria Gene Families AT1G14730 58.173 1.63e-85 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1180 K08360 - gmx:100305990 397.897