Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1166 ATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAGGGGGGGACATCTTGGTCTTCAGCTCATGCCTGGAATAACTGAACGAGACACAAAGCCATTTTTGCCTGGTCGTGATCCGGCTATGCTAATTGGTGCAAATGGAACTTTTCACCCACGAGATTGCGCTGTTTCAGAGGCACCAATGCCATTGAACTATGTCAGAGATAATTGGATAAACCCGAGAGATAGGTTTTTTAATATGCAGCAGCCCACAAATCCTAGTTATGCTGTTCTTCCAGAGACATCAGGAGCTCCTAACTTGCAAATTATACAGCCACCTGATTCGTCAAGTGACGAGAAAGTGGATAGAGTCGAAGAGGTAGCTGTCAAAAAGGAAGGTGGCCAGTCAAAGAAAAGGCAAACTAAGGGTGCTCTGTCGACTCCAAAAGCTAAGAAACCTAGGAAGCCGAAGGATAATGGCAATGCTCCAGTTCAACGTGCGAAGCCACCGAAGAAGACTATGGAGCTTGTGATTAATGGAATTGATATGGACATTTCTGGTCTACCTACTCCGGTTTGTTCATGCACTGGGGCTCCTCAGCAGTGTTATAGGTGGGGCTGTGGAGGTTGGCAATCGGCTTGTTGCACCACAAATGTGTCAATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTAGAGAAACTTGCTGCTGAAGGTTATAACTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCCAGACACGGCACCAACAAGTTTGTCACTATCAGGTAG 840 0.4571 MDDDVLNMPNWGYYEPFRGGHLGLQLMPGITERDTKPFLPGRDPAMLIGANGTFHPRDCAVSEAPMPLNYVRDNWINPRDRFFNMQQPTNPSYAVLPETSGAPNLQIIQPPDSSSDEKVDRVEEVAVKKEGGQSKKRQTKGALSTPKAKKPRKPKDNGNAPVQRAKPPKKTMELVINGIDMDISGLPTPVCSCTGAPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1166 279 MobiDBLite consensus disorder prediction 114 136 - -
Gso5g1166 279 MobiDBLite consensus disorder prediction 87 169 - -
Gso5g1166 279 Pfam GAGA binding protein-like family 1 279 IPR010409 -
Gso5g1166 279 SMART GAGA_bind_2 1 279 IPR010409 -
Gso5g1166 279 PANTHER - 1 279 IPR010409 -
Gso5g1166 279 MobiDBLite consensus disorder prediction 87 113 - -
Gso5g1166 279 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1166 Gso-Chr5 34920944 34922909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1166 1 279 BBR or BPC Transcription factor family AT2G01930 58.000 3.46e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gso5g1166 GAGA_bind 8.3e-105 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1166 - - gmx:100814354 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1166 5 34920944 34922909 Gso8g0770 8 7056600 7058568 GST