Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1121 ATGAATTGCAGTGAGGCAGCATCAGGAGGAGACATGAGTGTGAAACCTGCTGCATGGCTTGAGAGGCTTATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCATCAGAATCACAAGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCCCTTCTCACCGCTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTTTACCATGACGTGGTTCGATTGGGTGATCTGGAAAACCTCGTCGATTGTTCCAATATTCAGCCATATACCATTAACGGTGCGAAAGTGATATTCTTAAATCAGAGGCCACAATCAAGGTCATGCAAAGGCACTGCCAATTCTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCGCTTCTGTTCTCTGTCATGCAAGTTGGAGGGTCAAATAAGAGTTGATTGCTATACCCAATTTGTCCCCACTTCCTCCTGCTCGAATACTGAGGCTACCAGTAGCAGCATTGCCAACAACAACAACAACAACAAGACCAATGGCTTCTTCCTCTCTCTTGGAAGCAGGAGAAAGGGGGCTCCCCATAGAGCTCCACTCTCCTAG 603 0.4842 MNCSEAASGGDMSVKPAAWLERLMAETFFGGCGVHQNHKKNEKNVFCLHCCLSICPHCLPSHRSHSLLQVRRYVYHDVVRLGDLENLVDCSNIQPYTINGAKVIFLNQRPQSRSCKGTANSCCTCDRILQEPFRFCSLSCKLEGQIRVDCYTQFVPTSSCSNTEATSSSIANNNNNNKTNGFFLSLGSRRKGAPHRAPLS* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1121 200 Pfam PLATZ transcription factor 71 142 IPR006734 -
Gso5g1121 200 PANTHER OS02G0172800 PROTEIN 12 143 - -
Gso5g1121 200 ProSiteProfiles Zinc finger B-box type profile. 32 70 IPR000315 GO:0008270
Gso5g1121 200 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1121 Gso-Chr5 34464412 34469649 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso5g1121 PLATZ 5.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1121 - - gmx:100796559 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1121 5 34464412 34469649 Gso8g0716 8 6626879 6631625 GST