Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1104 ATGTCAATGGCTGCAACTCTCACTGCTGTAAGAATTCCCACTTTCCACCAACGCCATCTCAAACAACACTTCACGGCACCCTCTTCCTCTTCCTTACGCCTCCTCAATCTCGCAAAGATGGAAGGAAGTGAGATCAGTGAGCAAGTAGTAGGGGAGGATTTGGGAGCAAAGAAGAAAGTTTTTGTAGCTGGAGCCACTGGTAGCACTGGCAAAAGAATCGTTGAGCAGTTACTGGCAAAGGGTTTTGCTGTTAAGGCTGGGGTTAGAGACATCGACAAGGCCAAGACAATCCTTTCCTCTGCCAATCCATCTCTTCAAATTGTGAAAGCTGATGTCACAGAGGGTTCTGATAAGCTAGCTGAGGCCATTGGTGACGATTCAGAAGCAGTAGTATGTGCCACAGGCTTTCGCCCGGGGTGGGATTTACTTTCTCCCTGGAAGGTTGACAATTTTGGCACAGTAAACCTTGTTGAAGCATGCAGGAAACGCAATGTTAACAGATTCATTCTTATCAGTTCCATTTTAGTTAATGGAGCTGCTATGGGACAGTTACTGAATCCAGCTTACATCTTTCTTAATGTTTTTGGACTCACCTTGGTAGCGAAACTACAGGCAGAGAAATATATCAGGAAATCTGGTATAAACTATACAATAATAAGACCAGGCGGGTTGAGAAATGATCCTCCTACTGGAAATGTTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCTAGTTGCTGAAGTGGCTGTGGAGGCATTGGCTTATCCTGAGGCATTTTATAAAGTTGTGGAAATAGTGTCTCGCCCTGATGCTCCTAAACGCCCATACCATGACCTTTTTGGTTCCATAAGGCAACAATGA 879 0.4482 MSMAATLTAVRIPTFHQRHLKQHFTAPSSSSLRLLNLAKMEGSEISEQVVGEDLGAKKKVFVAGATGSTGKRIVEQLLAKGFAVKAGVRDIDKAKTILSSANPSLQIVKADVTEGSDKLAEAIGDDSEAVVCATGFRPGWDLLSPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAEKYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDLVAEVAVEALAYPEAFYKVVEIVSRPDAPKRPYHDLFGSIRQQ* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1104 292 PANTHER FLAVIN REDUCTASE-RELATED 40 292 - -
Gso5g1104 292 Pfam NAD(P)H-binding 64 261 IPR016040 -
Gso5g1104 292 CDD SDR_a5 59 274 - -
Gso5g1104 292 Gene3D - 47 279 - -
Gso5g1104 292 PANTHER - 40 292 - -
Gso5g1104 292 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 58 273 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1104 Gso-Chr5 34233170 34235365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1104 57 189 Monolignol Biosynthesis Gene Families AT2G33590 33.803 2.59e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1104 - - gmx:100792523 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1104 5 34233170 34235365 Gso8g0700 8 6408537 6410710 GST