Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1090 ATGGCAGCAGCCTCCTCCATGGCTCTCTCTTCCCCATCCTTGGCTGGCAAGGCCGTGAAGCTGGGCCCATCAGCCCCCGAAGTCGGGAGGGTCAGCATGAGGAAGACCGTCACCAAGCAGGCCTCCTCCGGAAGCCCATGGTACGGCCCAGACCGCGTCAAGTACTTGGGCCCATTCTCTGGCGAGCCCCCGTCCTACCTCACTGGCGAGTTCCCAGGTGACTACGGCTGGGACACTGCTGGGCTTTCGGCCGACCCAGAAACCTTCGCCAGAAACCGTGAGCTCGAAGTGATCCACTCCAGGTGGGCCATGCTCGGGGCCTTGGGCTGCGTCTTCCCCGAACTATTGTCCCGCAACGGGGTCAAGTTTGGAGAAGCTGTGTGGTTCAAGGCCGGGTCCCAGATCTTCAGCGAGGGTGGGCTGGACTACTTGGGCAACCCAAGCCTTGTCCACGCCCAGAGCATCCTCGCCATCTGGGCCACCCAAGTTATCCTAATGGGTGCTGTTGAGGGTTATCGTATTGCTGGTGGGCCCCTCGGTGAGGTCACTGACCCAATCTACCCTGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGCTTAAGGTGAAGGAACTCAAGAACGGGAGATTGGCCATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTCACCGGTAAGGGTCCATTGGAGAACCTTGCTGATCACCTTGCGGACCCAGTCAACAACAATGCCTGGGCCTACGCCACCAACTTCGTCCCCGGCAAGTGA 792 0.5934 MAAASSMALSSPSLAGKAVKLGPSAPEVGRVSMRKTVTKQASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1090 263 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 3 263 - -
Gso5g1090 263 Gene3D Chlorophyll a/b binding protein domain 54 256 - -
Gso5g1090 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 263 IPR001344 GO:0009765|GO:0016020
Gso5g1090 263 Pfam Chlorophyll A-B binding protein 63 229 IPR022796 -
Gso5g1090 263 SUPERFAMILY Chlorophyll a-b binding protein 46 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1090 Gso-Chr5 34092716 34093778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1090 3 263 Chloroplast and Mitochondria Gene Families AT1G29930 89.474 1.82e-172 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1090 K08912 - gmx:547862 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1090 5 34092716 34093778 Gso8g0688 8 6321847 6322862 GST