Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1085 ATGGAAAAGGAGCCTCTGCTCCCATACTTCAGCCCCAGAAAGAAGCCTCAACTATGTCCCTTGCCAGAGCACGACGAAATCGTTCTTCCAATGACCCCTTCAGAATTCAAGGACCGTCTCATCTTTGGTCCTTCTCCTTCCTCTGCTTCCCCAAGGGACCCTTCACCTCTTGCTGATGCCTTAACACTTTCTCACAATTCCCCAAAATGTTCCTCTTCTAACTCACAGGACTATGCATCATCACCACTATTTGATTCCCAACAAAAACAACAACAACTCAACTCTTGGCTCCTTGACCCCAATTACGAGTCGTGGCGGAAAACGAACCTTCATCGGTCGAAAACCGCGCCGGCCATGGCCGTGATCAGCGATTTCAACCCCCACTCCACCGTGCAAAGACCCAAATTTGCCAGCCAGAGTATTGTGTGCCAGGGTGTTATTCTTCTTGCTCTTTATTTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTCATAATTTTACAGCTACTGAGACTCATCCTATAGTTGATGCATTGTATTTTTGTATAGTGACAATGTGCACAATAGGGTACGGTGATATCACTCCCAATAGTACAGCCACTAAGCTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGTTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCAGTGAAGGGAAGGAGGGGTGAGAAGGATGGGAAGTCTTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGGTTGAAGGTGGCGCTGGCGTTGGGGGTTGTGGTGATTTGTATTGGGGTAGGTGTGGGGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGATTCGTTTTATCTTTCGGTTATGTCAGTTACCACGGTTGGGTATGGAGACCACGCGTTCAAGACCATGCACGGTCGGATCTTTGCTGCGATTTGGTTGCTTGTGTCGACGCTTGCTGTGGCCCGGGCGTTCCTCTATTTGGCTGAGGCGAGAGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCAGCAGACATAGACAATAATGGCTTTGTGAGTAAATCGGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTATCTGAGAAGGACATCATGCAGGTTAGTGAGAAGTTTGATAGACTAGATGCTGGCAACTGCGGAAAAATAACGCTTGCTGATCTTATGGGGAATCATAATTGA 1281 0.459 MEKEPLLPYFSPRKKPQLCPLPEHDEIVLPMTPSEFKDRLIFGPSPSSASPRDPSPLADALTLSHNSPKCSSSNSQDYASSPLFDSQQKQQQLNSWLLDPNYESWRKTNLHRSKTAPAMAVISDFNPHSTVQRPKFASQSIVCQGVILLALYLALGVVIYWFNRHNFTATETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGVGVGVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDIMQVSEKFDRLDAGNCGKITLADLMGNHN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1085 426 Gene3D - 270 332 - -
Gso5g1085 426 SUPERFAMILY Voltage-gated potassium channels 138 227 - -
Gso5g1085 426 MobiDBLite consensus disorder prediction 39 84 - -
Gso5g1085 426 SUPERFAMILY Voltage-gated potassium channels 256 362 - -
Gso5g1085 426 Gene3D - 333 426 - -
Gso5g1085 426 PRINTS Two pore domain K+ channel signature 184 212 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso5g1085 426 PRINTS Two pore domain K+ channel signature 304 313 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso5g1085 426 MobiDBLite consensus disorder prediction 60 84 - -
Gso5g1085 426 PANTHER TWO-PORE POTASSIUM CHANNEL 3 88 421 - -
Gso5g1085 426 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 88 421 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso5g1085 426 Pfam Ion channel 272 341 IPR013099 -
Gso5g1085 426 Pfam Ion channel 148 227 IPR013099 -
Gso5g1085 426 ProSitePatterns EF-hand calcium-binding domain. 370 382 IPR018247 -
Gso5g1085 426 Gene3D - 139 240 - -
Gso5g1085 426 SUPERFAMILY EF-hand 362 422 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1085 Gso-Chr5 33981732 33989972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1085 4 422 Ion Channels AT4G18160 62.731 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1085 K05389 - gmx:100787238 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1085 5 33981732 33989972 Gso8g0683 8 6247909 6251736 GST