Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1082 ATGGGTTTCACCTTCAGCACCATGACCCTCAACCTGGTCCTCCTAATGGCCATGGTTGCCACCAACATCCTCTCCCTCTACCACCTCTCCTCCACCCTCCAATCCCCCAAATCCCCCAAACCACCCCCACCAGTCCCCGACCAACTCCTCCACCAGCTCCACACCATACGCGCCACCATCAGTCACCTCACTCGCCTCCAGAACACCCACAACCCAGCACAAAAATCCACCATCCCCTCAGATCTACTCTTATACTCCCACCTCTCCCCAATAGCCTCTTCTTGCCACAACCACCCCGAACTCCTCCACAAGTACATGACTTACATTCCCTTCTCTCTCTGCCCCTCCGATTCTGACCTCGCCGAATCCCTAATCCTACGCGGTTGTCACCCCCTCCCCCGCCGCCGCTGCTTCTCCAAAACCCCGCAAAAACCCCCCGTTTCCCTTCCTGAAAACCCCTTCCCCTCCTCCCTCCCTGACAACGCCGTAATTTGGGACCATTACTCTTGCAAATCCTTCGATTGCTTGAACAAACAAAACCCCAACCTCGGTTTTGAACCTTCTCGGGATATTTCGAGGTTCAATTCGTATAAGACCGATTTGGATCTCCCGATCCAGCAGTTGTTACAGATCGCGGCGGCCGCGAAGTCGGCGCTGCGCCTCGGCCTCGACGTCGGCGGCGGCACCGGCTCCTTTGCCGCCTCGATGAGGCTCCGCAACGTGACCGTGGTGACCACGACCATGAACGTGGCGGTGCCGAACAGCGAGGCCGTCGCACTGCGGGGGCTCGTGCCGCTGCACGTGCCCCTGCAGCAGCGGCTGCCGCTGTTCGACGGCGTCGTGGATCTGGTGCGGTGCGGGCGCGCCGTGAACCGGTGGATTCCGTTGACGGTGATGGAGTTTCTGCTGCTGGATGTGGACAGGGTGCTGAGGGGCGGAGGGTACCTTTGGGTGGACCATTTTTTCAGCAAAGTGGTGGACCTTGAGAAGGTGTATGCGCCGTTGATTGGGAAATTAGGGTACAAGAAGGTGAAGTGGGCGACGGGGAATAAGACCGATGCCAGTGGCGTCAAGAATGGAGAAGTTTACTTGACTGCGTTGCTGCAGAAGCCTGTGTCCAGATGA 1125 0.5831 MGFTFSTMTLNLVLLMAMVATNILSLYHLSSTLQSPKSPKPPPPVPDQLLHQLHTIRATISHLTRLQNTHNPAQKSTIPSDLLLYSHLSPIASSCHNHPELLHKYMTYIPFSLCPSDSDLAESLILRGCHPLPRRRCFSKTPQKPPVSLPENPFPSSLPDNAVIWDHYSCKSFDCLNKQNPNLGFEPSRDISRFNSYKTDLDLPIQQLLQIAAAAKSALRLGLDVGGGTGSFAASMRLRNVTVVTTTMNVAVPNSEAVALRGLVPLHVPLQQRLPLFDGVVDLVRCGRAVNRWIPLTVMEFLLLDVDRVLRGGGYLWVDHFFSKVVDLEKVYAPLIGKLGYKKVKWATGNKTDASGVKNGEVYLTALLQKPVSR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1082 374 Gene3D Vaccinia Virus protein VP39 192 334 IPR029063 -
Gso5g1082 374 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 7 373 - -
Gso5g1082 374 PANTHER EXPRESSED PROTEIN 7 373 - -
Gso5g1082 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 218 324 IPR029063 -
Gso5g1082 374 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 205 316 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1082 Gso-Chr5 33954803 33958498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1082 - - gmx:100785300 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1082 5 33954803 33958498 Gso8g0680 8 6227239 6231253 GST
Gso5g1082 5 33954803 33958498 Gso8g1528 8 14888153 14896503 PCT