Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1058 ATGGTTACGATTTCTTCAACTTGGTACTTGTTTCTTCCCATAATTTTATCGTTATGCCCCATAACACTATGTGCATCAGTGCTAGAAGACCTCAAAAACTTACATCAACCACCAGATTTTAACTCTACAATTTTCTCCAACTGTCTCAAGAACCCGTCTCTAAGGTACTGCAGTTCCTCTCCGATGTTGGACCTTGATGAAATATTCAAGTTCACTATTGTTGCAAGCCATCTCTGCAATGAGTCAAAGAATCCCAATTGTGTGGAGTCATTCCCCAAAGTTGATCTTAGAAACCGACCAAACATTGCACCTCTTTATTTGTCCTTCGATTTCTTTTGGAAGTATTGCCCCTTAAGCATTATGTCCATTGATTTGTCAAACAATTCTATGAAGGGTGATTTTCCAACTGATGTTCTCTATTGCACTCAAATCCAGTCTCTTGATCTAAGTATCAATGCATTTTCTGGTGACATTCCAATTCAAAGTTTCTCTCCCCTTACCAACCTCACTTTTCTCAACCTCTCCTATAACTGCTTCTCAGAGAGTAAACTCTCTGATTCCCAATTCTTCAAAAGGTTTAACTCTTCTAGTTTTCTTCATTCTGGTGCTCTTTTGGATCAAAAAAGGTTTACAGTAAAGGCTATTTTTCTATTGGTTGGCTTTCCCATCCTTGTCATTTTGATGGTAATTTGCTTTTTATGGCTTTGTTTCCAAAGGCCTGATTTTCTACCAAGTAAACTTCAAAGAAGTAGGAGGTTTACACCGGCAATTCTAAAGGCAGCAACTAATGATTTTTCAAATAAGTATTTGGTAGGAAAGAGTGATGTTGTTCACATCTACAAAGGGATCTTGAGAGATGGTACTGAAGTGAAGATTGAGATGTACTGGGATGATATACCGAGGGATAGTTACCGTAAATTTGTTGAAGAATGTAAGGTTCTGTCTAAGTTACATCACAAGAACCTTGTTAGATTTCTGGGGTGGTGTAGGAGCAGAAAATTCAGGGCTATTATAACTGAATGGACAAGAGAAGAGAATGTTGAAATGTGGTTATCAGGGTCAGGTCCACCATGGAATCATAGACTGAAAGTGTTAATGGGAGTTGTTGCATGCATGCGTTATCTGCAGGAGGAATGGCCTGAAGTTGACTATGAACTCAACACAAGTAGTATTTTATTGTCTGACAATGTGGAACCATTGATTTCGAGGTTCAAAGTTGGAGATCAAAACAGCAATCGAAGAAAGATACATGGGTTTGGAGTATTTCTTCTAGAGATGATACTAAGTAGAAAGGTTCAAGAGGAGTTTGATGGAGGTGATGCTGGATTTATTAGATTCATGAGAACCCTTAATCTTGCAGATTTGAAGCAGATGATTGATGAGAGAATGAAAGTAACTGAAACAATTTTTCATCAAGTTAAACAGGCATTGTCTCTAGGATTAATGTGCATAGACCAATCAAACAGTGACAAGCCTAGCTTGGCCATGATATTTAACACTATAGCAAGAGCCTACAAGGCTAGCCATGCTTTGCCATCTGCAAATCATAGATTTAAGAGACACATGCCTGTTCAAACCAAATAA 1584 0.3813 MVTISSTWYLFLPIILSLCPITLCASVLEDLKNLHQPPDFNSTIFSNCLKNPSLRYCSSSPMLDLDEIFKFTIVASHLCNESKNPNCVESFPKVDLRNRPNIAPLYLSFDFFWKYCPLSIMSIDLSNNSMKGDFPTDVLYCTQIQSLDLSINAFSGDIPIQSFSPLTNLTFLNLSYNCFSESKLSDSQFFKRFNSSSFLHSGALLDQKRFTVKAIFLLVGFPILVILMVICFLWLCFQRPDFLPSKLQRSRRFTPAILKAATNDFSNKYLVGKSDVVHIYKGILRDGTEVKIEMYWDDIPRDSYRKFVEECKVLSKLHHKNLVRFLGWCRSRKFRAIITEWTREENVEMWLSGSGPPWNHRLKVLMGVVACMRYLQEEWPEVDYELNTSSILLSDNVEPLISRFKVGDQNSNRRKIHGFGVFLLEMILSRKVQEEFDGGDAGFIRFMRTLNLADLKQMIDERMKVTETIFHQVKQALSLGLMCIDQSNSDKPSLAMIFNTIARAYKASHALPSANHRFKRHMPVQTK* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1058 527 ProSiteProfiles Protein kinase domain profile. 265 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1058 527 SUPERFAMILY L domain-like 88 182 - -
Gso5g1058 527 Gene3D Phosphorylase Kinase; domain 1 240 341 - -
Gso5g1058 527 Gene3D Ribonuclease Inhibitor 72 193 IPR032675 -
Gso5g1058 527 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 520 - -
Gso5g1058 527 Pfam Protein tyrosine and serine/threonine kinase 271 402 IPR001245 GO:0004672|GO:0006468
Gso5g1058 527 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 520 - -
Gso5g1058 527 SUPERFAMILY Protein kinase-like (PK-like) 243 502 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1058 Gso-Chr5 33682540 33684236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1058 117 516 Receptor kinase-like Gene Family AT4G20450 24.270 5.40e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gso5g1058 PK_Tyr_Ser-Thr 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1058 - - gmx:100779045 1074.31