Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1044 ATGGCGTCGTCGAAGCTTGTCTCGACGAATCCGGATCTTCCACGGGACCCTTCTTCTTCATCATCTTCGTCTTCTTCTATATCTCCCCTTTCTTCTCTTCTCTCCGATCTGCACCCCATGGACGACCTCCTCAAGTCCATCACCCCCAATTCCGTCGACGACTTCTGGAAGGGGATCGCTGCCGCCTCCACCGACAATGCCGGCGGCGTGACCCTCGAGGATTTCCTCACCAAGGCCATCCCCGTCACAGAGGAAGACGTCAGAGGTGCTCCTCCTCCTCCTCCTTCTTTTCTCCCCTTCCCTGCCGAAGGCTCTTCCTCCTCCGTTGAGCCTTTCGCTAATAATGGCGTTGGCAGCGCGCCCTCAAACTCGGTTCAGAAAGGGAAGAGAAGGGCCGTGGAGGAACCGGTTGACAAGGCAACGCTTCAGAAGCTGAGGAGGATGATCAAGAATAGAGAGTCTGCTGCTAGGTCCAGGGAGCGCAAGCAGGCTTACACATCTGAGCTTGAGTATCTGGTTCACCAGCTAGAGCAAGAGAATGCGCGGTTATTAAAGGAAGAGCTCTTTGAGTGCATCATTCCAATTGAGGTGATGCCTAAACCGAAGAAAAAACTTCGGAGAGTAAATTCAGCACAATCATTGTGA 645 0.5333 MASSKLVSTNPDLPRDPSSSSSSSSSISPLSSLLSDLHPMDDLLKSITPNSVDDFWKGIAAASTDNAGGVTLEDFLTKAIPVTEEDVRGAPPPPPSFLPFPAEGSSSSVEPFANNGVGSAPSNSVQKGKRRAVEEPVDKATLQKLRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLLKEELFECIIPIEVMPKPKKKLRRVNSAQSL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1044 214 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 141 186 IPR004827 GO:0003700|GO:0006355
Gso5g1044 214 SMART brlzneu 139 211 IPR004827 GO:0003700|GO:0006355
Gso5g1044 214 Coils Coil 166 186 - -
Gso5g1044 214 SUPERFAMILY Leucine zipper domain 143 186 IPR046347 GO:0003700|GO:0006355
Gso5g1044 214 Gene3D - 143 191 - -
Gso5g1044 214 PANTHER OS05G0437700 PROTEIN 2 212 - -
Gso5g1044 214 MobiDBLite consensus disorder prediction 104 138 - -
Gso5g1044 214 Pfam bZIP transcription factor 140 186 IPR004827 GO:0003700|GO:0006355
Gso5g1044 214 MobiDBLite consensus disorder prediction 104 126 - -
Gso5g1044 214 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 212 IPR043452 GO:0003700|GO:0045893
Gso5g1044 214 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 146 161 IPR004827 GO:0003700|GO:0006355
Gso5g1044 214 MobiDBLite consensus disorder prediction 1 32 - -
Gso5g1044 214 CDD bZIP_plant_BZIP46 143 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1044 Gso-Chr5 33495872 33499832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1044 51 210 bZIP Transcription Factor Family AT5G44080 40.000 1.75e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso5g1044 bZIP_1 6e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1044 K14432 - gmx:778147 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1044 5 33495872 33499832 Gso8g0642 8 5919082 5922769 GST