Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1037 ATGAATGACGTAAGGAAACTGGTGCAAGACTTAAAGCCTGTATTTCTGATGGTATCGGTGCAAATTGCATACTCTTCCGTGAATGTGCTCTATAAGCTCGCCATAAATGATGGAATGAGCATTAGGGTAGTCACTGCCTACCGCCTAATGTTCGCAGTAGTTTTCACTTCTTCTCTTGCTCTTATTTTCGAAAGAAAGAGCAGGCCAAAGCTGACATGGAGGGTGCTTTTCATGTCATTCTTTAGTGGCTTATTTGGTGCAAGTTTATTTCATAACCTATTCCTCGAGGCATTGGATTTGGTGTCAGCAACATTCGCTACTGCTGTTTATAATCTCGTTCCTGCAGTCACTTTTATATTGGCCATCTTGTGCGGCATGGAAAAGTTAAATGTGCGAACCGCAGCAGGGAAGGCCAAGGTGATGGGAACAATAATAGGAATTGGTGGGTCAATGTTGCTGACATTTTTCAAAGGGCAAGAGATTAACGTTAAGAGTTTCGGTACTAATCTTTTGCAAAAGAATGAGCAGGTAGTAGCTTTGCATACTGACTCTGGTAAAAAATTTCTGGGAGTTTTGTGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTCATCATTCAGTCCAAGATGAGTAAAGAATACCCAAGTCATCACTCAAGTACTGCATTGATGTCCTTGATGGCTGCAATACAAGCCACGGCCTTTGCCCTTTATGTTGAGAAGGATTGGAGCCAGTGGAAGTTGGGTTCGACTATTAGGATTCTAACTGTGGCTTATACGGCAATTGTGGCCTCCGGATTAGTGGTTATTGTCATTGCATGGTGTGTACGGATGAGAGGCCCAATGTTTGTATCTGTTTTCAACCCTCTTATGCTTGTGCTTGTGGCTGTGGCTGATTCCTTGATGTTTGGTGAAAATTTATATGTAGGAAGTGTAATGGGAGCCATGCTAATTGTGGGTGGCTTGTACATGGTTCTATGGGGTAAGAGCAAAGAAATGAAAAAGGCGAATCTGTCGGTCTCATCAGAAATCAACCAAGAGCATGAAGCAACTGAAGTTGTTGTCATGTCCACAACAATAAATGATGATAATTGTGACCGCGTTAACAATACCGACGCCAATTGTAAAAGCAATATAGTTGCCAAGGTTTCTTGA 1158 0.4214 MNDVRKLVQDLKPVFLMVSVQIAYSSVNVLYKLAINDGMSIRVVTAYRLMFAVVFTSSLALIFERKSRPKLTWRVLFMSFFSGLFGASLFHNLFLEALDLVSATFATAVYNLVPAVTFILAILCGMEKLNVRTAAGKAKVMGTIIGIGGSMLLTFFKGQEINVKSFGTNLLQKNEQVVALHTDSGKKFLGVLCGFGSCFSFALWLIIQSKMSKEYPSHHSSTALMSLMAAIQATAFALYVEKDWSQWKLGSTIRILTVAYTAIVASGLVVIVIAWCVRMRGPMFVSVFNPLMLVLVAVADSLMFGENLYVGSVMGAMLIVGGLYMVLWGKSKEMKKANLSVSSEINQEHEATEVVVMSTTINDDNCDRVNNTDANCKSNIVAKVS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1037 385 PANTHER WAT1-RELATED PROTEIN 12 360 - -
Gso5g1037 385 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Gso5g1037 385 Pfam EamA-like transporter family 12 152 IPR000620 GO:0016020|GO:0016021
Gso5g1037 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 332 - -
Gso5g1037 385 PANTHER WAT1-RELATED PROTEIN 12 360 IPR030184 GO:0016021|GO:0022857
Gso5g1037 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1037 Gso-Chr5 33403373 33407551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1037 11 364 Nodulin-like Gene Family AT1G25270 39.155 2.86e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1037 - - gmx:100813812 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1037 5 33403373 33407551 Gso8g0637 8 5870477 5879859 GST
Gso5g1037 5 33403373 33407551 Gso15g0428 15 3918470 3924173 PCT
Gso8g1515 8 14746224 14751908 Gso5g1037 5 33403373 33407551 PCT