Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1034 ATGATGGGTGTAGGAGCTGTTAAGAAAGATGAAAGGGCTATGCTACTTGCTGGTTTTGCAGGATTAGTTGCAGGGACTTGTGGCATGGCGATAGGAGAGTTTGTAGCTGTGTGCACTCAGTATGAAGTTGAGGTAGGTCAAATGAAGAGAGAGATGAATAATGAGGAGAAAGACTTGGAGATGGGGATGGAGAAAAGAGGATTGCCTAATCCATTGCAAGCTACTTTGGCATCTGCAGTGTCCTTTTCTATAGGTGCATTGGTGCCTCTACTTTCAGCTGCTTTCATAGAAAACTACAGGACTAGGGTTATTGTGGTTGTGGCAATGGTTAGCTTGGCTTTGGTGGTGTTTGGAAGGGTGGTGGCTCAGCTGGGAAAAACTCATAAGATGAAATCTTGTGTAAGGTTCCTTCTTGGAGGATGGATAGCCATGGCTATCACTTTTGGGTTGACCAAATTACTTGGTGCTAAAGCTTTAGATAAAGAATAA 489 0.4356 MMGVGAVKKDERAMLLAGFAGLVAGTCGMAIGEFVAVCTQYEVEVGQMKREMNNEEKDLEMGMEKRGLPNPLQATLASAVSFSIGALVPLLSAAFIENYRTRVIVVVAMVSLALVVFGRVVAQLGKTHKMKSCVRFLLGGWIAMAITFGLTKLLGAKALDKE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1034 162 Coils Coil 38 58 - -
Gso5g1034 162 Pfam VIT family 1 62 IPR008217 GO:0005384|GO:0030026
Gso5g1034 162 Pfam VIT family 57 151 IPR008217 GO:0005384|GO:0030026
Gso5g1034 162 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 156 IPR008217 GO:0005384|GO:0030026
Gso5g1034 162 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1034 Gso-Chr5 33333466 33336819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1034 1 159 Nodulin-like Gene Family AT3G43660 59.119 1.15e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1034 K22736 - gmx:100810586 305.834