Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1027 ATGAACGAGTTATCTCAGAAGCAGACTCTTGTTGTCCATGGGATTGCTGGTGCTGGTTCGGTGGCTTTAGCCACCGCCTTCACTTACCCTCTTGACACCATGAAAGTCCTCATTCAGGTTGGTTCCAGCACCGGTAAAGAATTGGACCATGCCCATGTTTTGACCAGACTACTCTCTGTATCCGGCAATGCAGGTTTGTTCAATGGTTTTGGCTGGTTGTTGGTTGGAAGGATTTTTGGTCTGGGAGCACGATTTGGGGTTTATGAAATCCTGTCTGCCTTTTATAAAGATGGTCGGGAAAATAATTATTTGTTTGCTTCTGAGGCTCTTTTGGCTGGCGTGGTAGCTGGTGCCATTGAGGCAGTCATAAGCTCTCCATTCGAACTCATCAAGCTTCGTATGCAAGTTAGCTCTGCTTCATATGTTCCTAGCTCCAACTTTGCTTTGGAAAAGGGGGCTCGTACACCTTTAATTGCAAGATTACTTCATGGCTGTTATCCAGACAGGAGGGCATTGGACCAATATATTGGTCTCATCTCCACCCTAAAAGCCAAAAATACAAACCTGACCAGTGCGTTGCTAGAGTATCCATGGACAATGACAGGATCTGGGAGTCCACCATCAGTTTCCAATGTCAGGAGACCATCTGACATTATATCTTTGGAAGGATGGAGCACATTATGGAGAGGTCTCCGTTCTGGAATTGTCCGAGATTCTGTGTTTGGTGGCGTATTTTTTTCGACCTGGCAATTTCTGCACCAAGCAATGCTAGATTGGAAGGCTGCAGGGATGAATCCTCCACCCAGGTTAAATGAAGAAGTCGGTCCATTGTCTCCTTTGACTGTTAGTCTTACTGCTGGATTCTCAGCTTCAGTTGCTGCTGCTGCTTCCCATAGTTTTGATACTACAAGAAGTAGATCGCAGTGTACTGTGCTGCCAAAGTACATCTCTATGGAGAGAAAGATTCTGAAGTGGAAACGACCAGGAAACAAGTTTGAAAGAATTACTGGGATCCATCCTTCTGACAGGGGTGTCTTGTTCCGTGGTATTGGTTGGCGAATGGCTCGCTCTGGGTTGGCTTCATTCATTATTGTAGGAAGTTATTTATTTGTTGCTGATCAGCTTGCTTCTAGTTTGACTTAA 1143 0.4523 MNELSQKQTLVVHGIAGAGSVALATAFTYPLDTMKVLIQVGSSTGKELDHAHVLTRLLSVSGNAGLFNGFGWLLVGRIFGLGARFGVYEILSAFYKDGRENNYLFASEALLAGVVAGAIEAVISSPFELIKLRMQVSSASYVPSSNFALEKGARTPLIARLLHGCYPDRRALDQYIGLISTLKAKNTNLTSALLEYPWTMTGSGSPPSVSNVRRPSDIISLEGWSTLWRGLRSGIVRDSVFGGVFFSTWQFLHQAMLDWKAAGMNPPPRLNEEVGPLSPLTVSLTAGFSASVAAAASHSFDTTRSRSQCTVLPKYISMERKILKWKRPGNKFERITGIHPSDRGVLFRGIGWRMARSGLASFIIVGSYLFVADQLASSLT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1027 380 SUPERFAMILY Mitochondrial carrier 9 368 IPR023395 -
Gso5g1027 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 255 IPR018108 -
Gso5g1027 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Gso5g1027 380 Pfam Mitochondrial carrier protein 108 143 IPR018108 -
Gso5g1027 380 Pfam Mitochondrial carrier protein 8 96 IPR018108 -
Gso5g1027 380 PANTHER CARRIER PROTEIN 4 376 - -
Gso5g1027 380 Gene3D Mitochondrial carrier domain 10 379 IPR023395 -
Gso5g1027 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1027 Gso-Chr5 33246987 33250861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1027 29 258 Antiporters AT1G79900 23.194 2.88e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1027 - - gmx:100813634 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1027 5 33246987 33250861 Gso8g0626 8 5802079 5805841 GST