Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1018 ATGACCAATATGCAGCGAGTGGTTTCATCTTTCATGTCTTTGTTTCTTATTCTTTGGATGTTTGTGGTGCTTGACTTAGTGATCAAGGTTTCTGGCAACGCAGAAGGTGATGCTCTGATGGCATTGAAGAACAATATGATTGATCCTAGTGATGCTCTTCGTAGCTGGGATGCTACCCTTGTCCATCCTTGCACATGGTTACATGTTTTTTGCAACAGTGAAAATAGCGTAACTCGTGTTGATCTTGGAAATGAAAACCTTTCGGGTCAACTTGTTCCACAGCTTGGTCAGCTCCCAAATTTGGAATACTTGGAACTTTATAGTAATAATATAACTGGGGAAATCCCAGTAGAGCTTGGAAGTTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACAAAATTACTGGTCCCATTCCAGATGGATTGGCCAACCTTAAAAAATTAAAATCCCTGCGTCTCAACAATAACAGCTTGTCAGGAAACATTCCTGTGGGTTTGACCACTATTAATTCACTGCAAGTGCTGGATTTAGCAAACAATAACTTAACAGGAAATGTCCCAGTCTATGGTTCTTTTTCAATTTTTACTCCCATCAGTTTTAAAAATAATCCTTTCTTGTATCAAACCACTCCAGTTACACCAGCTGCTACACCGCAACAAAATCCTTCAGGTAATGGTATCACAGCCATTGGAGTCATTGCAGGAGGAGTTGCTGTGGGTGCTGCACTGTTGTTTGCATCCCCAGTAATTGCAATTGTTTACTGGAATAGAAGGAAGCCACCGGATGATTACTTTGATGTTGCAGCTGAGGAGGATCCTGAAGTTAGCTTTGGTCAGCTTAAAAAGTTTTCACTGCCTGAACTGCGGATTGCAACAGATAACTTTAGTAACAACAATATTCTTGGTAAAGGTGGATATGGCAAGGTTTATATAGGACGTTTAACAAATGGTGGTAATGTAGCAGTAAAAAGACTTAACCCTGAACGCATCCGAGGCGAGGATAAGCAATTTAAAAGAGAAGTGGAAATGATCAGCATGGCTGTGCATCGAAATTTGCTTCGCCTGATTGGTTTTTGTATGACGTCTTCTGAACGCTTGCTTGTGTATCCTTTAATGGTTAATGGAAGTTTAGAGTCATGTTTACGAGAGCCTTCGGAATCAAAACCACCACTTGAATGGCCGATGCGGAAGCGTATTGCTCTGGGAGCTGCTAGGGGGCTTGCTTATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTCAAAGCTGCTAACATATTGTTGGATGACGAATTTGAAGCAGTTGTAGGAGATTTTGGTTTAGCAAGGATTATGGATTACCAAAATACTCATGTTACTACTGCTGTATGCGGTACGCATGGCCATATAGCACCAGAGTATCTCACAACTGGAAGGTCTTCAGAGAAGACTGATGTTTTTGGATATGGCATGATGCTTCTTGAAATAATAACTGGACAGAGGGCTTTTGATTTAGCACGATTCGCCAGGGATGAGGATATCATGTTGCTTGAATGGGTGAAAGTACTTGTGAAAGACAAGAAGTTGGAGACACTGGTGGATGCAAATTTACGGGGAAATTGTGATATAGAGGAAGTAGAGGAGTTGATCCGGGTGGCCTTGATATGCACACAAAGGTCCCCTTATGAAAGACCAAAGATGTCTGAGGTGGTGAGAATGCTGGAGGGTGAAGGTTTGGCAGAAAAGTGGGATGAATGGTTGAATATGCAAGAGGATATACAAAATTTCACCTTCAATCTCTGCACTCCTTATGACTCAAATCCAAATATTCAACCAGATGTTCTGTCAGGTCCTAGATGA 1848 0.4134 MTNMQRVVSSFMSLFLILWMFVVLDLVIKVSGNAEGDALMALKNNMIDPSDALRSWDATLVHPCTWLHVFCNSENSVTRVDLGNENLSGQLVPQLGQLPNLEYLELYSNNITGEIPVELGSLTNLVSLDLYLNKITGPIPDGLANLKKLKSLRLNNNSLSGNIPVGLTTINSLQVLDLANNNLTGNVPVYGSFSIFTPISFKNNPFLYQTTPVTPAATPQQNPSGNGITAIGVIAGGVAVGAALLFASPVIAIVYWNRRKPPDDYFDVAAEEDPEVSFGQLKKFSLPELRIATDNFSNNNILGKGGYGKVYIGRLTNGGNVAVKRLNPERIRGEDKQFKREVEMISMAVHRNLLRLIGFCMTSSERLLVYPLMVNGSLESCLREPSESKPPLEWPMRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDDEFEAVVGDFGLARIMDYQNTHVTTAVCGTHGHIAPEYLTTGRSSEKTDVFGYGMMLLEIITGQRAFDLARFARDEDIMLLEWVKVLVKDKKLETLVDANLRGNCDIEEVEELIRVALICTQRSPYERPKMSEVVRMLEGEGLAEKWDEWLNMQEDIQNFTFNLCTPYDSNPNIQPDVLSGPR* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1018 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Gso5g1018 615 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Gso5g1018 615 SUPERFAMILY L domain-like 35 199 - -
Gso5g1018 615 Gene3D Transferase(Phosphotransferase) domain 1 373 590 - -
Gso5g1018 615 PANTHER BNAA08G11770D PROTEIN 14 598 IPR031048 GO:0004675|GO:0005102|GO:0006468
Gso5g1018 615 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 598 - -
Gso5g1018 615 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Gso5g1018 615 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Gso5g1018 615 SUPERFAMILY Protein kinase-like (PK-like) 276 571 IPR011009 -
Gso5g1018 615 SMART serkin_6 296 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1018 615 Gene3D Phosphorylase Kinase; domain 1 265 371 - -
Gso5g1018 615 ProSiteProfiles Protein kinase domain profile. 296 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1018 615 Pfam Protein kinase domain 297 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1018 Gso-Chr5 33154667 33162586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1018 17 615 Receptor kinase-like Gene Family AT4G33430 63.553 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gso5g1018 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1018 K13416 - gmx:100804708 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1018 5 33154667 33162586 Gso8g0618 8 5722434 5730101 GST