Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1012 ATGGATGTTTTATCTTTAAGATCAAGTTCAAGCCTAAGCATGTCCAAGCCCTTTGAATCTCATGGCCTTCCACTCTCAAGTAAACAACATCGAAGACCTTCTAGTGTGAAGTTTGGTAGTGTTTCATGCAGAGCCACAACGTTAACCCAAGAAAACTTGTACAAAATATTATCTGTGAGTCCAGGAAGTGCAACAATGGATGAGATCAAGAGGGCTTATAGGTCAATGGCTCTTCAGTACCACCCTGATGTGTGCCATGATCCTTCCATGAAGGAGGAGTCAACGAGGATGTTTGTTCAGCTAAATGCAGCTTACGAGACCTTGTCCAATCCAAGGCTTAGAGAACAGTATGATAGTGAATTGGGTTTGAGAAGCGAAGTGATGAGTGTTAGTAGTGATCATGAGAGGTGGAGAAGTGTGAGTGTTAGTAGTGAACATGAGAGATGGGAAAGTAGGTTTCAGGAGCAAGTGATTGAGTTGAAGACAAGGTCTCGTAGACGTATGGGACAAAAGGGTGGATCATCGGGTAGCAGAATGAGGGCACCAAACATGAGAGACAGGAATTAA 567 0.4339 MDVLSLRSSSSLSMSKPFESHGLPLSSKQHRRPSSVKFGSVSCRATTLTQENLYKILSVSPGSATMDEIKRAYRSMALQYHPDVCHDPSMKEESTRMFVQLNAAYETLSNPRLREQYDSELGLRSEVMSVSSDHERWRSVSVSSEHERWESRFQEQVIELKTRSRRRMGQKGGSSGSRMRAPNMRDRN* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1012 188 MobiDBLite consensus disorder prediction 160 188 - -
Gso5g1012 188 MobiDBLite consensus disorder prediction 1 36 - -
Gso5g1012 188 Pfam DnaJ domain 52 118 IPR001623 -
Gso5g1012 188 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Gso5g1012 188 ProSiteProfiles dnaJ domain profile. 52 121 IPR001623 -
Gso5g1012 188 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 5 187 - -
Gso5g1012 188 SUPERFAMILY Chaperone J-domain 46 117 IPR036869 -
Gso5g1012 188 Gene3D DnaJ domain 40 148 IPR036869 -
Gso5g1012 188 CDD DnaJ 52 110 IPR001623 -
Gso5g1012 188 PRINTS DnaJ domain signature 55 73 IPR001623 -
Gso5g1012 188 PRINTS DnaJ domain signature 73 88 IPR001623 -
Gso5g1012 188 PRINTS DnaJ domain signature 93 113 IPR001623 -
Gso5g1012 188 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 5 187 - -
Gso5g1012 188 SMART dnaj_3 51 113 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1012 Gso-Chr5 33097420 33098311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1012 54 119 C2H2 Transcription Factor Family AT1G74250 44.118 6.31e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1012 - - gmx:100811478 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1012 5 33097420 33098311 Gso8g0615 8 5706111 5706998 GST