Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0986 ATGGGCACGTACCCCACTGAGAAGGTTTTCTTTCAATTCCCAGCAGGTCTTAGGGTCCTTGCAGTTGATCATGACACCACTATTCTTGATGTCATTAAGAAAATGTGTTTTCGATGCCACTACCGCGCTGTCACATACTCCGATGCCTCACTTGCTTTGAATTATGTTCGGGAGAAGAAAGATTGCATTGATGTGATACTCATTGAAGTTCACATGCCATATGGGGATAGCTATGAATTCCTTCAGCATGTGACTGTGGAAACTAATATTCCAGTTATCATGATGTCTCTCGATGATGCTAAGAGTACTGTGATGAAGGCTATTATAGATGGAGCTTGTGATTATAGGATTAAGCCTTTGCATGAGAACCAATTCAAGATTATGTGGAAGCATGTTGCTAGGAAACTCTGGAGTAAAAATCAGCTACCAAAAAAAGAAGATTCTGAATATGTTGCTTCTTATGTTCTTGATTCAACAGTTATGGACCCAGAAAAGATTGGTTCAAATTTCAAAGATTCTGACTCTTATGAACCGGGTGATTCTTTTGCACCCCCAGCAAAGAAACCACGTGTTAGAAATATAGACATCATAGAATCCAAGGGAAGGGCAGGTGCATATGGAGTGACACTGAAACAGAACGAGAAGGCATTGCAAAACTACATAGAATCCAAGGGAAGGGAAGGTGCATATGGAAGGTTTGATTCAATAGCTTTTGGTGATACCAGCCATGTTCTCTATGCAGCCCTTCATCCCGAGGGGCTGACAAGTAACGTGACGCCAAGAGAAGAAGACGAATCATTCCCAAGCATAACAAAATGTAGCAACAATGTTAAATCAGAATTTTTGATACTGTGA 855 0.4082 MGTYPTEKVFFQFPAGLRVLAVDHDTTILDVIKKMCFRCHYRAVTYSDASLALNYVREKKDCIDVILIEVHMPYGDSYEFLQHVTVETNIPVIMMSLDDAKSTVMKAIIDGACDYRIKPLHENQFKIMWKHVARKLWSKNQLPKKEDSEYVASYVLDSTVMDPEKIGSNFKDSDSYEPGDSFAPPAKKPRVRNIDIIESKGRAGAYGVTLKQNEKALQNYIESKGREGAYGRFDSIAFGDTSHVLYAALHPEGLTSNVTPREEDESFPSITKCSNNVKSEFLIL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0986 284 CDD REC_typeB_ARR-like 19 133 - -
Gso5g0986 284 Gene3D - 17 150 - -
Gso5g0986 284 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 191 IPR045279 GO:0009736
Gso5g0986 284 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 8 191 - -
Gso5g0986 284 Pfam Response regulator receiver domain 19 125 IPR001789 GO:0000160
Gso5g0986 284 SMART REC_2 17 129 IPR001789 GO:0000160
Gso5g0986 284 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Gso5g0986 284 SUPERFAMILY CheY-like 16 143 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0986 Gso-Chr5 32543355 32544886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0986 13 135 Response Regulator Gene Family AT4G16110 45.528 9.06e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso5g0986 Response_reg 3.4e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0986 - K14491 gmx:102662429 578.556