Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0972 ATGGGAAGTGGAGTTTCAACACTCTGTTGGTGCTCTGGGACCAACAACGAGCCCGACGTTATTTTCAGCGCCACCGACCCACTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATCCTCCGCACGCTTCCTCTCTCCCACTCACTCCGATCGCTTCCTCAGTCCTTCTACTTCCCTTCGTTTCTCTCCGACCCATACCCGACCCGAATTTCACGAAACCGGGTTCAAAGCCATTTCCGGAGCCTCCGTCAGCGCCAACAGCTCCCTTCCGACAACAGTCATTCACTTGGACGAAGAGGTGAACGGAGTTTCCTCCAGGGGTAATATCGTAAATGGCTTCGAAAGCACGGCGTCGTTTTCCGCCCTCCCGCTCCAGCCCGTTCCCCGAGGCGGCGAGCCCTTCGAGGTCAGCGGCTTCTTCCTCTCCGGTCCAATTGAAGCCAACGCCGTCTCCGGCCCTCTCCCTTCCGCCGCCGCCTACGGAGTCGGCGGCGGCGATGTTCCTTTCTCGGCGCCGCTGGCCGGACTTTACAGTAAGAAGAACAAGAAGAAGGTGATTTCGGGGTTCCGGAAGACCTTCAACCGGAACACGCCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGCTGAACTTTGCCGGAAGAAAAGAAAGCGAGGGAAGGCCGCAGCAGCCGCCGCAGGCGGCGGCGGCGGCGAGCAATGTGCAGTGGGCGTTGGGGAAGGCTGGTGAGGATCGCGTCCACGTGGTGGTGTCGGAGGAGCTTGGATGGTTGTTCGTCGGGATTTACGACGGTTTCAACGGCGGCGACGCGCCGGAGTTTCTGATGGGGAACCTCTACCGCGCCGTTCATAACGAGCTTCAGGGTTTGTTCTGGGAACTTGAAGAAGAAGAACAACCGTTACCGCAAGAGAGCAATCCAGTGGTGGAAGGAACGGAGAGTAAACGGCGTAAGCTGTGGGAGCTTCTTGCCGAGGATGGACTCGACCTTTCGGGTTCGGATAGGTTCGCGTTTTCCGTGGACGATGCGTTGAGCGTTAACAACGCCAATGCTGGGTCTGCTGTGAGTAGAAGGTGGTTGTTGCTGTCGAAGCTGAAGCAGGGGTTGACGAAGCAGAAGGAGGGTGAAGGGAGAGGGTGGAATATGGGGAATGAGGAGAAGGAGAGGGAGAATCAAGAGAAGCATTGTGGGAGGAAGAGGAGAGTGGGACCGGTGGATCATGGACTGGTTTTGAGTGCCTTGTCTCGGGCGCTTGAAGTCACCGAGCTTGCTTATTTGGATATGACGGATAAGCTGCTGGACACGAATCCGGAGCTTGCTTTGATGGGTTCGTGTTTGTTGGTTGCATTGATGAGGGATGAGGATGTGTATGTCATGAATGTTGGGGATAGTCGGGCTATTGTTGCTCACTATGAACCGAAAGAGGTTGATTCTAGTGTTGAATTGGGAAGCAAGAGAGGTGTTGAGTCCGGTGCCCAGAGCATAGTTGAGGTCCCCCTGGGTTTGGGTCAAATTGGGAGTGCTCAACAAAAGAGGTTGGTGGCATTGCAGCTGTCCACTGATCACAGCACCAGCATTGAAGAAGAAGTCATTAGGATTAAAAACGAGCATCCTGATGATGCCCAATGTATAGTCAATGGCAGAGTTAAAGGTCGCCTTAAGGTCACCAGAGCATTTGGGGCTGGATTTTTGAAACAGCCGAAGTGGAATGATGCCGTACTAGAGATGTTTCGTAATGAATTTATTGGCACTGCTCCATATATATCCTGCTCTCCTTCACTATGTCACCATAGATTATGCCAGAGAGACCAGTTCCTGATCCTCTCATCTGATGGTTTATATCAATATCTAAACAATGATGAAGTGGTTTCTCATGTTGAGAGCTTCATGGAAAAATTTCCGGAAGGAGATCCAGCCCAACATTTAATAGAAGAACTGCTGCTCCGTGCAGCTAAGAAGGCTGGAATGGATTTTCATGAATTGCTGGATATCCCACAAGGAGATCGGAGGAAGTATCACGATGACGTTACTGTCATGGTGATATCACTTGAAGGGAGAATCTGGAAATCATCAGGGAAGTATCCATGA 2091 0.5285 MGSGVSTLCWCSGTNNEPDVIFSATDPLDETLGHSFCYVRSSARFLSPTHSDRFLSPSTSLRFSPTHTRPEFHETGFKAISGASVSANSSLPTTVIHLDEEVNGVSSRGNIVNGFESTASFSALPLQPVPRGGEPFEVSGFFLSGPIEANAVSGPLPSAAAYGVGGGDVPFSAPLAGLYSKKNKKKVISGFRKTFNRNTPEKKRPWVVPVLNFAGRKESEGRPQQPPQAAAAASNVQWALGKAGEDRVHVVVSEELGWLFVGIYDGFNGGDAPEFLMGNLYRAVHNELQGLFWELEEEEQPLPQESNPVVEGTESKRRKLWELLAEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKQGLTKQKEGEGRGWNMGNEEKERENQEKHCGRKRRVGPVDHGLVLSALSRALEVTELAYLDMTDKLLDTNPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAHYEPKEVDSSVELGSKRGVESGAQSIVEVPLGLGQIGSAQQKRLVALQLSTDHSTSIEEEVIRIKNEHPDDAQCIVNGRVKGRLKVTRAFGAGFLKQPKWNDAVLEMFRNEFIGTAPYISCSPSLCHHRLCQRDQFLILSSDGLYQYLNNDEVVSHVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0972 696 MobiDBLite consensus disorder prediction 374 400 - -
Gso5g0972 696 Pfam Protein phosphatase 2C 517 652 IPR001932 -
Gso5g0972 696 SMART PP2C_4 227 682 IPR001932 -
Gso5g0972 696 SUPERFAMILY PP2C-like 230 685 IPR036457 -
Gso5g0972 696 Gene3D - 216 691 IPR036457 -
Gso5g0972 696 PANTHER PROTEIN PHOSPHATASE 2C 15 303 IPR015655 GO:0004722|GO:0006470
Gso5g0972 696 PANTHER PROTEIN PHOSPHATASE 2C 372 694 IPR015655 GO:0004722|GO:0006470
Gso5g0972 696 PANTHER PROTEIN PHOSPHATASE 2C 29 15 303 - -
Gso5g0972 696 PANTHER PROTEIN PHOSPHATASE 2C 29 372 694 - -
Gso5g0972 696 CDD PP2Cc 407 684 IPR001932 -
Gso5g0972 696 ProSiteProfiles PPM-type phosphatase domain profile. 229 684 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0972 Gso-Chr5 31944469 31949877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0972 1 695 PP2C-type Phosphatase Gene Family AT2G35350 55.220 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0972 - - gmx:100781535 1357.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0972 5 31944469 31949877 Gso17g1297 17 12904051 12908997 GST
Gso1g1711 1 53858828 53864151 Gso5g0972 5 31944469 31949877 PCT
Gso11g0363 11 3133155 3138672 Gso5g0972 5 31944469 31949877 PCT
Gso5g0972 5 31944469 31949877 Gso1g1711 1 53858828 53864151 PCT
Gso5g0972 5 31944469 31949877 Gso11g0363 11 3133155 3138672 PCT