Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso5g0967 | ATGCCAGTTCCACTTGCCCCATACCCAACACCACCAGCTCCATATACACCACCAGCTAATGGTGTACAGAGTCAACTTGTCTGTTCTGGGTGCAGAAACCTTCTAGTGTTCCCAGTTGGAGCCACCTCTGTGTGCTGTGCTGTTTGCAATGCTGTCACAGCAGTACCACCTCCTGGCACAGAAATGGCCCAGTTAGTATGTGGAGGTTGCCATACTTTACTCATGTACATCCGGGGCGCGACAAGTGTGCAATGTTCTTGTTGTCACACTGTCAATCTAGCTTTGGAAGCAAATCAGGTGGCACATGTCAACTGTGGCAACTGCAGGATGCTACTCGCGTACCAATATGGAGCAAGATCCGTGAAATGTGCAGTTTGCAATTTTGTAACATCAGTTGGGGCCACAGCAAGCACCACTGAGCAGAAGTTCAGCACTTAA | 438 | 0.4932 | MPVPLAPYPTPPAPYTPPANGVQSQLVCSGCRNLLVFPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLAYQYGARSVKCAVCNFVTSVGATASTTEQKFST* | 146 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso5g0967 | 145 | SUPERFAMILY | Multiheme cytochromes | 28 | 126 | IPR036280 | - | |
Gso5g0967 | 145 | Pfam | LSD1 zinc finger | 67 | 91 | IPR005735 | - | |
Gso5g0967 | 145 | Pfam | LSD1 zinc finger | 28 | 52 | IPR005735 | - | |
Gso5g0967 | 145 | Pfam | LSD1 zinc finger | 105 | 129 | IPR005735 | - | |
Gso5g0967 | 145 | PANTHER | PROTEIN LSD1 | 1 | 142 | IPR040319 | - | |
Gso5g0967 | 145 | TIGRFAM | LSD1: zinc finger domain, LSD1 subclass | 25 | 55 | IPR005735 | - | |
Gso5g0967 | 145 | TIGRFAM | LSD1: zinc finger domain, LSD1 subclass | 64 | 93 | IPR005735 | - | |
Gso5g0967 | 145 | TIGRFAM | LSD1: zinc finger domain, LSD1 subclass | 102 | 132 | IPR005735 | - | |
Gso5g0967 | 145 | PANTHER | PROTEIN LOL1 | 1 | 142 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso5g0967 | Gso-Chr5 | 31682340 | 31684843 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-LSD | Gso5g0967 | zf-LSD1 | 5.1e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso5g0967 | - | - | gmx:100306356 | 276.174 |