Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0925 ATGTCTTTCGACTCCTCAAACCACCCAATTAGTCCTGACTTGTATTGCAGTGAAGTAACTAGCGAAGTGATTCACTTGGATTCCGATGATGAGGCTCTGAAGTTCAATGTTCTATGGGGAGACTCTGATCATGATGATAGTGATGATGAAAGCATTCTATTGAACTTGTTAGAATCCGAACACAACCAAGTGCAAGAACAAACAAAGTTCCTAGGACAACAACTTCGCAAAAAAACATGGCTGATTAATGCTCGAGAAGAGGCCATAAATTGGATCCTAAAGGTGCATGCATACTACAGTTTTAAACCCGAGACAGCGTATCTTTCCGTAGATTACTTCAATCGTTTCCTCTTGTCACACACCTTTACGCAAGATAAAGCATGGCCTCTGCAGCTGCTATCAGTGACTTGTCTTTCACTAGCAGCAAAAATGGAAGAAAGCAAAGTGCCACTTCTTTTGGACCTGCAAGTGATCGAGTCAAGGTTCCTGTTTAAGCCCAAAACAGTTCAGAGGATGGAGCTTTTGGTTATGGCCAGTCTCAAGTGGCGATTGCGCACTATAACCCCTTTTGATTTTGTGCATCTTTTCATTTCCAAGCTTTTGTGCTCTGCTTCCACATGGGGAGATTTAAGTTACATTGTTTCTCTTGTCTCGGATGTTATCATCAGAACATGTCTAGTCATGGATTTCTTGGAGTTTTCACCATCCACAATAGCAGCAGCAGCACTGTTATGGGTAACCAATCAATGTGTAGATGACAAGAAATCATATTGCCTCCACAAGAATATAAGCATTGAAATGGTGAAGAAATGTTACAAACTAATGAAGCAGAAACTCATCATTCGCCGATCAGAACTTTATTGGCCAAAGACTTCACAATTATTGCCCCGAAGTCCCACCTGTGTGCTTGATCATGCAGCAGCTATGCAAGAAAGCAGTGATGCTCACAAGCTCTGA 957 0.418 MSFDSSNHPISPDLYCSEVTSEVIHLDSDDEALKFNVLWGDSDHDDSDDESILLNLLESEHNQVQEQTKFLGQQLRKKTWLINAREEAINWILKVHAYYSFKPETAYLSVDYFNRFLLSHTFTQDKAWPLQLLSVTCLSLAAKMEESKVPLLLDLQVIESRFLFKPKTVQRMELLVMASLKWRLRTITPFDFVHLFISKLLCSASTWGDLSYIVSLVSDVIIRTCLVMDFLEFSPSTIAAAALLWVTNQCVDDKKSYCLHKNISIEMVKKCYKLMKQKLIIRRSELYWPKTSQLLPRSPTCVLDHAAAMQESSDAHKL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0925 318 Gene3D - 66 185 - -
Gso5g0925 318 Pfam Cyclin, N-terminal domain 52 184 IPR006671 -
Gso5g0925 318 SUPERFAMILY Cyclin-like 45 184 IPR036915 -
Gso5g0925 318 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 1 310 - -
Gso5g0925 318 SUPERFAMILY Cyclin-like 169 285 IPR036915 -
Gso5g0925 318 SMART cyclin_7 90 178 IPR013763 -
Gso5g0925 318 SMART Cyclin_C_2 187 312 IPR004367 -
Gso5g0925 318 CDD CYCLIN 85 177 IPR013763 -
Gso5g0925 318 Pfam Cyclin, C-terminal domain 187 279 IPR004367 -
Gso5g0925 318 Gene3D - 54 272 - -
Gso5g0925 318 PANTHER CYCLINS 1 310 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0925 Gso-Chr5 30254247 30256140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0925 13 290 Core Cell Cycle Gene Families AT1G70210 37.979 1.19e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0925 K18810 - gmx:100781193 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0925 5 30254247 30256140 Gso17g1346 17 13820318 13822086 GST