Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0909 ATGAAAGCTCATCATCATCATCATCATCATTTGAGCTTCTTTTCTATCCTATCATTGTTCACTCTATTCTTCTCCACTTCCCAAACTACCATTACCAACAAAACTCAATTATCAGTTCACAATGAAACAAGAAGAATTCTCCACCAGCCGTTGTTCCCGGCGGTGTCGGCTCCACCGCCGGTTACTCCGCCACCGCCGGCGCCGCTGGATATTCCGTCTTCTCCCGACATTCCTTTCTTCAACGAGTATCCCGCTGGGCAGCCGCCGCCGGTGCAGAATCTGCCTCCGGTGACAACCTCTGGCGGTATGATCGCGAACCCAACTGCGACGCAGCCAACGAAACCCGCGAAGAAGGTGGCAATTGTGATCTCCGTGGGAATTGTTACACTTGGAATGTTCTCTGCATTAGGCTTCTTCTTATACAGACACAGAGTGAGACACCCGGCAGAGACGCAGAAACTGGTTTCTCGGAAGGTTCTAGAAGATTCTCCGCGGGCCCCACCACCGCCGCCACCCTCGAGCTTCCTCTACATTGGCACGGTGGAGCCCACCAGAACTTCGCTGAGCGAACCCAATGGAATAACCGTTAACACTTCCCCTTATCGGAAACTTGATTCCATTAAGCTTAGCTCCAATCACCGTTACCGCCCCAGCCCCGAGTTGCAGCCGCTGCCGCCGCCGCACAAGCCTCCGGACGAGAGCCATTCGCCGGCGGCGGAATTCTCCGACTCCTCATCCTCTTCTGAGGAGGAAAGCTGCGAGACGGCGTTCCACTCGCCGCACGGCTCCTCGCTCGGCTGCGAAGAGAATTTCTTTACGCCGGTCTCGCGCCACAGTTGTCTCTCCGCTGCCGCGGCGGCACCGGTGGTTCCTCACTCGAAGAGAACTTCTCCGAAATCCCGGTTTTCCGCTCCTACTCCGGAGATCAGAAACATTGTCGTTCCGCCGGTTAAGCCTTCTCCGGCACCGGCGCCGGTGCCGGCCGCTTCAACAAAATATCATCACGTGGACAAAGAATTAACATTGGGTCCTTCTAGAAGACCCAAATTCTCATCGCATCCCCCAGCACCGAATTTGACTCATCTTCATTCAAATGAGTTCACAACTTCACTTAAACCTCCTCCTCCTCCGCCACCGCCACCACCGCCACCACAGACACTGCCGTTGAGAAAGGTCTGGTCTCTGTCAATTAGTACATCTTCTTCCTCAGTGTCAAGGAAGAACGGAGAGTCATGGTCCCCAAATGAAGGAGGGTCTTCTGGTAACCGTGTTAGTGTAAGGAAAGGTTCTTTTGAGGAAGTTTACCAAAGGCGTGAAGGTGATGATGTGGATGGAGCAAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGTCTACTACTTCGGACCGTGCCACTGTGTGGGACCAGTTAAAATTCAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACACTGTTTGGCTGCAAATCCACAGGTTCTGCTTCTAAAGAGAATGTTACTAGAAGATCAGTTCTTCCTCCTGCTGAACCGGAGAATAGGGTGTTGGATCCAAAGAAGTCTCAAAACATAGCTATACTGCTAAGGGCACTCAATGTGACTAGAGATGAGGTGTGCGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTAGGAAGTGAGCTATTGGAGACTCTAGTGAAGATGGCTCTAACAAAGGAGGAAGAAATAAAACTTAAAGATTATGATGGTGACCTCTCAAGACTTGGCTCTGCAGAAAGATTCCTTAAAGCAGTGCTTGATATCCCTTTAGCTTTTAAAAGAATTGAAGCTATGCTGTACAGAGCTAATTTTGAAACTGAAGTTAACTACCTTAGGAAGTCCTTTCAGACCCTGGACGTGGCAAGTGAGGAATTAAAGAACAGTCGGTTATTCCTCAAACTTCTTGAAGCTGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACAAATCGCGGTGGCGCTATATCTTTCAAACTGGACACACTTCTAAAACTTGTAGACATAAAGGGCACAGATGGGAAGACAACACTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGAACAGGCGGTGAATCTGCAAACTGCAATGTTCAAAACCAAACGAATTCCCAATTCAGCGAGGATGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGGGACCTTGGAAATGTCAAAAAGGCAGCAGGAATGGACTCGGATGTTTTAAGCAGCTATGTCTCAAAGCTTGAAATTGGACTTGACAAAGTGAGATTAGTTTTGCAATGTAGAAAGCCGGATATGCACGGGAATTTCTTTAACTCAACTGCACTGTTTCTGAAAGATGCTGAAGAGGAAATTGTTAGGATCAAGGCTGATGAGAGAAAGGCCTTGTTCCTTGTGAAAGAAGTTACAGAATACTTTCACGGGGATGCAGCAAAGGAAGAAGCGCACCCTTTCCGAATTTTTATGGTTGTAAGAGACTTTCTAAATAGTTTGGATCAAGTCTGCAAAGAAGTGGGAAGGATGCAGGATAGGACTGTGATTGGTTCAGCTAGATCCTTCAGGATAGCCGCAAGTGCATCGTTACCTGTTCTCAACAAGTACCATGCAAGACAAGATAGAAGTTCAGATGAGGAAAGCTTATCCCCCTAG 2670 0.4828 MKAHHHHHHHLSFFSILSLFTLFFSTSQTTITNKTQLSVHNETRRILHQPLFPAVSAPPPVTPPPPAPLDIPSSPDIPFFNEYPAGQPPPVQNLPPVTTSGGMIANPTATQPTKPAKKVAIVISVGIVTLGMFSALGFFLYRHRVRHPAETQKLVSRKVLEDSPRAPPPPPPSSFLYIGTVEPTRTSLSEPNGITVNTSPYRKLDSIKLSSNHRYRPSPELQPLPPPHKPPDESHSPAAEFSDSSSSSEEESCETAFHSPHGSSLGCEENFFTPVSRHSCLSAAAAAPVVPHSKRTSPKSRFSAPTPEIRNIVVPPVKPSPAPAPVPAASTKYHHVDKELTLGPSRRPKFSSHPPAPNLTHLHSNEFTTSLKPPPPPPPPPPPPQTLPLRKVWSLSISTSSSSVSRKNGESWSPNEGGSSGNRVSVRKGSFEEVYQRREGDDVDGAKPKLKALHWDKVSTTSDRATVWDQLKFSSFQLNEDMMETLFGCKSTGSASKENVTRRSVLPPAEPENRVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGSELLETLVKMALTKEEEIKLKDYDGDLSRLGSAERFLKAVLDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLDVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGGAISFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESANCNVQNQTNSQFSEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEIGLDKVRLVLQCRKPDMHGNFFNSTALFLKDAEEEIVRIKADERKALFLVKEVTEYFHGDAAKEEAHPFRIFMVVRDFLNSLDQVCKEVGRMQDRTVIGSARSFRIAASASLPVLNKYHARQDRSSDEESLSP* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0909 889 Pfam Formin Homology 2 Domain 445 838 IPR015425 -
Gso5g0909 889 MobiDBLite consensus disorder prediction 238 259 - -
Gso5g0909 889 MobiDBLite consensus disorder prediction 206 264 - -
Gso5g0909 889 SMART it6_source 440 853 IPR015425 -
Gso5g0909 889 PANTHER FORMIN-LIKE PROTEIN 9 889 - -
Gso5g0909 889 MobiDBLite consensus disorder prediction 312 326 - -
Gso5g0909 889 MobiDBLite consensus disorder prediction 287 330 - -
Gso5g0909 889 MobiDBLite consensus disorder prediction 156 178 - -
Gso5g0909 889 ProSiteProfiles Formin homology-2 (FH2) domain profile. 440 864 IPR015425 -
Gso5g0909 889 MobiDBLite consensus disorder prediction 391 426 - -
Gso5g0909 889 Gene3D Formin, FH2 domain 442 850 IPR042201 -
Gso5g0909 889 PANTHER FORMIN-RELATED 9 889 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso5g0909 889 SUPERFAMILY Formin homology 2 domain (FH2 domain) 374 850 - -
Gso5g0909 889 MobiDBLite consensus disorder prediction 370 388 - -
Gso5g0909 889 MobiDBLite consensus disorder prediction 342 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0909 Gso-Chr5 29774563 29779871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0909 389 879 FH2 protein (formin) Gene Family AT5G67470 68.548 0.0 636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0909 5 29774563 29779871 Gso17g1361 17 13997187 14002210 GST
Gso1g1661 1 53284321 53289723 Gso5g0909 5 29774563 29779871 PCT
Gso11g0419 11 3665725 3671008 Gso5g0909 5 29774563 29779871 PCT
Gso5g0909 5 29774563 29779871 Gso1g1661 1 53284321 53289723 PCT
Gso5g0909 5 29774563 29779871 Gso11g0419 11 3665725 3671008 PCT