Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0906 ATGGGAGAGTTTGAGTTTGCTCCAACGGTGCTTGTGAGTGTGAGAGAGTTCGACCCAAATAACGACAGAGAGGGAGTGGAAGCCGTTGAAAGAATATGTGAGGTTGGACCCAATGGAAAGCTTTCCCTCTTCACCGACCTCCATGGTGACCCAATTTGCAGGGTCCGCAACTCACCTACTTTCCTCATGCTGATAGCCGAAATTGGGCAAGAGACAGTAGGAATGATAAGAGGTTGCATCAAAACCGTTACTTGCGGAAAAAAGCTCCATAGGCAAGGAAAAAGCAACACGGAAACCGAACCAAAACAAGTCCCTATTTACACAAAACTCGCATACATATTAGGCCTCCGTGTTTCTCCACATCACAGGAGAATGGGAATAGGTTTTAAGCTTGTACAGAGTATGGAGGAATGGTTCAGGGATAACGGAGCGGAATACGCGTACATGGCTACGGAGAAAGACAACGTGGCATCGGTTAAGTTGTTCACGGACAAATGCGGGTATTCAAAGTTCCGTACACCGTGCATTCTCGCGAACCCCGTTTTTGCTCACCACGTGAGAATCTCTAACAAAGTCACAATCATTGAGCTCTCACCGAATGACGCCGAATTGCTCTACCGCAGCAAGCTCGCCACGACGGAGTTCTTCCCGCGCGACGTGGACTCCGTGCTCGGCAACAGGCTTAGCCTGGGCACCTTCCTCGCCGTCCCGCGTGTTGGCTCGTACCAGCCCGACACGTGGTCCGGCTCGGCCCGGTTTTTATTGGACCCACCACCTTCTTGGGCCATTCTCAGCGTGTGGAACTGCAAGGATGTGTTCACGCTCGAGGTGAAAGGCGTGTCGCGCGTGAAGAAGACGCTTGCCAAGACCACTCGCGTCCTCGATCGCGTCTTTCCCTGGCTGCGCTTGCCGTCAGTCCCCAATTTCTTTGAGCCCTTCGGGTTTCTTTTTTTGTATGGGCTTGGTGGGGAGGGCCCGCAGGCCCAGCAGATGTTACGGGCTTTGTGCGGGTTTGCCCATAACTTAGCTAAGGATCGTGGCTGCGAGGTCGTGGCCACCGAAGTTTCAAGCCAAGAACCCTTACGGTGTGCCATCCCGCACTGGAAGATGCTCTCATGTGAAGAAGATCTGTGGTGCATTAAGAGATTAGGAGAAGATTACAGTGATGGCTCTCTTGGTGATTGGACAAAATCGCCTCCAGGATTCTCAATTTTTGTTGATCCAAGAGAGGTTTAA 1236 0.5178 MGEFEFAPTVLVSVREFDPNNDREGVEAVERICEVGPNGKLSLFTDLHGDPICRVRNSPTFLMLIAEIGQETVGMIRGCIKTVTCGKKLHRQGKSNTETEPKQVPIYTKLAYILGLRVSPHHRRMGIGFKLVQSMEEWFRDNGAEYAYMATEKDNVASVKLFTDKCGYSKFRTPCILANPVFAHHVRISNKVTIIELSPNDAELLYRSKLATTEFFPRDVDSVLGNRLSLGTFLAVPRVGSYQPDTWSGSARFLLDPPPSWAILSVWNCKDVFTLEVKGVSRVKKTLAKTTRVLDRVFPWLRLPSVPNFFEPFGFLFLYGLGGEGPQAQQMLRALCGFAHNLAKDRGCEVVATEVSSQEPLRCAIPHWKMLSCEEDLWCIKRLGEDYSDGSLGDWTKSPPGFSIFVDPREV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0906 411 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 52 170 IPR016181 -
Gso5g0906 411 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 10 410 - -
Gso5g0906 411 PANTHER N-ACETYLTRANSFERASE 10 410 - -
Gso5g0906 411 Pfam Acetyltransferase (GNAT) family 54 168 IPR000182 GO:0016407
Gso5g0906 411 CDD NAT_SF 63 148 - -
Gso5g0906 411 Gene3D - 45 173 - -
Gso5g0906 411 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 193 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0906 Gso-Chr5 29691225 29693288 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso5g0906 Acetyltransf_1 1.6e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0906 - - gmx:100775317 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0906 5 29691225 29693288 Gso17g1364 17 14088478 14090674 GST
Gso1g1658 1 53256808 53258909 Gso5g0906 5 29691225 29693288 PCT
Gso11g0421 11 3698231 3700317 Gso5g0906 5 29691225 29693288 PCT
Gso5g0906 5 29691225 29693288 Gso1g1658 1 53256808 53258909 PCT
Gso5g0906 5 29691225 29693288 Gso11g0421 11 3698231 3700317 PCT