Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0905 ATGGCCCTAAGGCCCTTCCATTTCAACTCCTTCTCGCGCGATAGATTGCTCTTTCTCCTCTGCTCCTCCCTTTCCCATTCCTCCTTTCCCTCTCCCCTCCGCTCCCCCAATTTCCCCCAAACTTTCTCCCTCCGCCGCTTCGCCGCCGCCCCTCTCGCTCGCCCTCCGCCGCCGCCTCCGCCCCTGGACGCCATGGCCCAGAAAATCGGAAAGTCCACGCGCCGCCCCGGCTCGTCCTCCAAGGCCCGCGTCTACGCCGATGTCAACGTCGTTCGCCCCAAGGAATATTGGGACTACGAGTCCCTCAACGTCCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGTAGGGGGAAATACAGTGAGGTGTTCGAAGGTGTTCACTGCACGGACGGTGAGAAATGTGTCATTAAGATCCTGAAACCCGTGAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCTAATATTGTACAGTTGCTTGACATTGTTAGAGACCAACAGTCGAAGACCCCAAGTCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTATCCTACATTGTCAGACTACGAAATACGATATTATATTTATGAACTTCTGAAGGCACTGGATTATTGCCATTCACAAGGAATCATGCATCGTGATGTGAAACCACATAATGTAATGATTGATCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAAGAATATAATGTTCGCGTGGCATCAAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGAGTCTTGGTTGTATGTTTGCTGGGATGATATTCCGTAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAACTGGTCAAAATAGCTAAGGTACTTGGGACAGACGGATTAAGTGCATATTTAGATAAGTATCGAATAGAGTTGGACCCACATCTTGCAGCACTTATCGGGAGGCATAGCCGCAAGCCATGGGCAAAGTTCATTAATGTAGAAAATCATCACATGGCTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTATTACGCTATGATCACCAAGAACGTCCCACAGCAAAAGAAGCCATGGCCCATCCATACTTCAATCCAGTTAGAAATGCAGAAAGTAGTAGAACTCGTGCACATTGA 1236 0.4676 MALRPFHFNSFSRDRLLFLLCSSLSHSSFPSPLRSPNFPQTFSLRRFAAAPLARPPPPPPPLDAMAQKIGKSTRRPGSSSKARVYADVNVVRPKEYWDYESLNVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDGEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVQLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYEIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDGLSAYLDKYRIELDPHLAALIGRHSRKPWAKFINVENHHMAVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPVRNAESSRTRAH* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0905 411 Gene3D Phosphorylase Kinase; domain 1 112 188 - -
Gso5g0905 411 PANTHER BNAA04G13490D PROTEIN 30 403 - -
Gso5g0905 411 ProSiteProfiles Protein kinase domain profile. 112 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0905 411 SMART serkin_6 112 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0905 411 SUPERFAMILY Protein kinase-like (PK-like) 81 401 IPR011009 -
Gso5g0905 411 Pfam Protein kinase domain 112 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0905 411 MobiDBLite consensus disorder prediction 391 411 - -
Gso5g0905 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Gso5g0905 411 Gene3D Transferase(Phosphotransferase) domain 1 189 397 - -
Gso5g0905 411 CDD STKc_CK2_alpha 93 397 IPR045216 GO:0004674|GO:0006468
Gso5g0905 411 PANTHER CASEIN KINASE II SUBUNIT ALPHA 30 403 IPR045216 GO:0004674|GO:0006468
Gso5g0905 411 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0905 Gso-Chr5 29647325 29659566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0905 110 398 Core Cell Cycle Gene Families AT1G76540 30.195 2.23e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Gso5g0905 Pkinase 3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0905 K03097 - gmx:100776388 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0905 5 29647325 29659566 Gso17g1365 17 14113142 14120280 GST