Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0889 ATGAGTTCGTTTCGTAAACCCTTCGTGGCCATTCTCTGGGTTGTTCTGTTTCTGGGTCTCCATGAGGCAGCGGAACCAGAGAAGAGCACATACATTGTACACGTGGCGAAATCGGAGATGCCGGAGAGCTTCGAGCACCACGCGCTGTGGTACGAGTCGTCGCTCAAGACCGTGTCTGACTCGGCGGAGATTATGTACACCTACGACAACGCGATCCACGGCTACGCGACGAGGCTAACCGCTGAGGAAGCGCGTTTGCTCGAGACCCAAGCGGGGATTCTGGCTGTCCTCCCGGAGACGAGGTACGAGCTTCACACTACGAGGACGCCCATGTTCCTCGGACTCGACAAGAGCGCCGACATGTTCCCCGAGTCGAGTTCCGGGAGTGACGTCATCATCGGAGTCCTCGACACCGGCGTCTGGCCGGAGAGCAAGAGCTTCGACGACACGGGACTTGGGCCTGTTCCGAGCACCTGGAAAGGCGCGTGCGAGACGGGAACGAATTTCACCGCGTCGAATTGTAACAGAAAGCTGATCGGAGCGAGGTTTTTCTCGAAGGGTGTTGAAGCCATTCTTGGTCCTATTAATGAAACCGAGGAGTCGAGATCAGCGCGCGACGACGACGGCCACGGCACCCACACGGCCAGCACAGCCGCGGGGTCGGTGGTATCCGACGCGAGCCTCTTCGGCTACGCGTCCGGGACAGCACGTGGGATGGCCACGCGCGCTAGAGTTGCTGCATACAAGGTGTGCTGGAAGGGAGGATGCTTCAGCTCCGACATTCTTGCCGCTATCGAGAGGGCAATATTGGACAACGTAAACGTTCTGTCTCTGTCGCTCGGTGGTGGCATGTCGGATTATTACAGAGACAGTGTCGCTATTGGAGCTTTTTCCGCTATGGAGAATGGGATTTTAGTTTCATGCTCCGCTGGGAACGCGGGCCCCAGTCCCTACAGTCTCTCCAATGTGGCTCCATGGATAACTACCGTGGGCGCTGGTACACTGGATCGTGACTTCCCCGCTTACGTTGCGCTCGGGAATGGCCTTAACTTCTCCGGCGTTTCGCTCTATCGCGGTAACGCTGTGCCGGATTCTCCTCTGCCTTTTGTTTATGCGGGTAATGTGAGTAACGGCGCTATGAATGGGAACTTGTGTATCACGGGAACGTTGTCTCCTGAGAAAGTTGCTGGGAAGATTGTTTTGTGTGACCGTGGGTTAACTGCTAGGGTTCAGAAAGGCTCCGTGGTGAAATCCGCCGGAGCGTTGGGCATGGTGCTCAGCAACACCGCTGCCAACGGCGAGGAGCTGGTGGCGGATGCTCATTTGTTACCTGCCACCGCGGTTGGGCAGAAAGCCGGTGACGCTATTAAGAAGTATTTGTTTTCTGATGCGAAACCGACGGTGAAGATTTTGTTTGAAGGCACAAAGTTGGGGATTCAGCCATCTCCTGTGGTGGCAGCGTTTAGCTCTAGAGGACCCAACTCGATCACCCCGCAGATCCTTAAGCCAGATCTTATCGCGCCAGGTGTCAACATCCTAGCCGGGTGGTCCAAGGCGGTGGGACCCACCGGGTTACCCGTTGATAACAGGCGCGTGGATTTCAACATCATTTCTGGCACGTCCATGTCGTGCCCTCACGTGAGCGGCTTAGCCGCGCTGATCAAGTCGGCTCACCCTGATTGGAGCCCAGCCGCGGTCCGATCGGCTCTTATGACAACGGCTTACACAGTTTACAAAACCGGTGAGAAGCTGCAAGACAGCGCAACGGGAAAGCCCTCCACGCCGTTCGATCACGGTTCCGGACACGTGGACCCCGTCGCTGCCCTCAATCCAGGACTCGTCTACGATCTAACGGTGGATGATTATTTAGGTTTTCTCTGCGCGTTAAACTACTCAGCTTCCGAGATCAACACATTGGCCAAGAGAAAATTCCAGTGCGACGCGGGCAAGCAGTACAGTGTGACCGACCTCAACTACCCTTCGTTTGCGGTGTTGTTTGAATCTGGGGGCGTGGTTAAGCACACGCGGACTCTCACGAACGTGGGGCCCGCGGGAACTTACAAAGCTTCAGTAACGTCAGATATGGCTTCCGTGAAAATCTCGGTTGAACCGCAAGTGCTGAGTTTCAAGGAAAATGAAAAAAAATCATTCACGGTCACATTTTCATCCTCGGGTTCGCCACAGCAAAGAGTGAACGCTTTTGGAAGGGTAGAATGGTCCGATGGGAAGCACGTGGTTGGAACCCCAATTTCGATTAATTGGGGTTGA 2268 0.5538 MSSFRKPFVAILWVVLFLGLHEAAEPEKSTYIVHVAKSEMPESFEHHALWYESSLKTVSDSAEIMYTYDNAIHGYATRLTAEEARLLETQAGILAVLPETRYELHTTRTPMFLGLDKSADMFPESSSGSDVIIGVLDTGVWPESKSFDDTGLGPVPSTWKGACETGTNFTASNCNRKLIGARFFSKGVEAILGPINETEESRSARDDDGHGTHTASTAAGSVVSDASLFGYASGTARGMATRARVAAYKVCWKGGCFSSDILAAIERAILDNVNVLSLSLGGGMSDYYRDSVAIGAFSAMENGILVSCSAGNAGPSPYSLSNVAPWITTVGAGTLDRDFPAYVALGNGLNFSGVSLYRGNAVPDSPLPFVYAGNVSNGAMNGNLCITGTLSPEKVAGKIVLCDRGLTARVQKGSVVKSAGALGMVLSNTAANGEELVADAHLLPATAVGQKAGDAIKKYLFSDAKPTVKILFEGTKLGIQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKAVGPTGLPVDNRRVDFNIISGTSMSCPHVSGLAALIKSAHPDWSPAAVRSALMTTAYTVYKTGEKLQDSATGKPSTPFDHGSGHVDPVAALNPGLVYDLTVDDYLGFLCALNYSASEINTLAKRKFQCDAGKQYSVTDLNYPSFAVLFESGGVVKHTRTLTNVGPAGTYKASVTSDMASVKISVEPQVLSFKENEKKSFTVTFSSSGSPQQRVNAFGRVEWSDGKHVVGTPISINWG* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0889 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Gso5g0889 755 Pfam Peptidase inhibitor I9 30 105 IPR010259 -
Gso5g0889 755 Pfam Subtilase family 128 582 IPR000209 GO:0006508|GO:0008236
Gso5g0889 755 Gene3D Peptidase S8/S53 domain 130 622 IPR036852 GO:0004252|GO:0006508
Gso5g0889 755 CDD Peptidases_S8_3 102 575 IPR034197 -
Gso5g0889 755 Pfam Fibronectin type-III domain 656 752 IPR041469 -
Gso5g0889 755 Gene3D - 626 754 - -
Gso5g0889 755 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Gso5g0889 755 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Gso5g0889 755 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Gso5g0889 755 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 753 - -
Gso5g0889 755 Pfam PA domain 388 456 IPR003137 -
Gso5g0889 755 MobiDBLite consensus disorder prediction 195 216 - -
Gso5g0889 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 753 IPR045051 -
Gso5g0889 755 SUPERFAMILY Subtilisin-like 104 613 IPR036852 GO:0004252|GO:0006508
Gso5g0889 755 SUPERFAMILY PA domain 372 457 IPR046450 -
Gso5g0889 755 Gene3D - 336 478 - -
Gso5g0889 755 ProSiteProfiles Serine proteases, subtilase domain profile. 101 609 - -
Gso5g0889 755 CDD PA_subtilisin_like 342 470 - -
Gso5g0889 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 105 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0889 Gso-Chr5 29206809 29209869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0889 2 754 Subtilisin-like Serine Gene Family AT5G67360 70.728 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0889 - - gmx:100815413 1506.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0889 5 29206809 29209869 Gso17g1388 17 14666469 14669367 GST
Gso11g0434 11 3818678 3821374 Gso5g0889 5 29206809 29209869 PCT
Gso5g0889 5 29206809 29209869 Gso11g0434 11 3818678 3821374 PCT